RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 MR1Q95460 341 aa12.55□□□□□ -0.4
NCLN-201ENST00000246117 WDR34Q96EX3 536 aa12.55□□□□□ -0.4
NCLN-201ENST00000246117 COX14Q96I36 57 aa12.55□□□□□ -0.4
NCLN-201ENST00000246117 OR2A5Q96R48 311 aa12.55□□□□□ -0.4
NCLN-201ENST00000246117 SLC39A1Q9NY26 324 aa12.55□□□□□ -0.4
NCLN-201ENST00000246117 SLC17A4Q9Y2C5 497 aa12.55□□□□□ -0.4
NCLN-201ENST00000246117 MDC1Q14676 2089 aaKnown RBP12.54□□□□□ -0.4
NCLN-201ENST00000246117 OR5K3A6NET4 321 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 P2RY10O00398 339 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 SPINT1O43278 529 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 HCRTR1O43613 425 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 CD38P28907 300 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 HNRNPKP61978 463 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■□□ 18.9
NCLN-201ENST00000246117 C3P1Q6ZMU1 363 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 RNF165Q6ZSG1 346 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 SLC35F3Q8IY50 421 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 CA13Q8N1Q1 262 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 GALNT6Q8NCL4 622 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 ADAMTS14Q8WXS8 1223 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 PELI1Q96FA3 418 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 ACTR6Q9GZN1 396 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 CST11Q9H112 138 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 KCND3Q9UK17 655 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 AKAP6Q13023 2319 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 TLX3O43711 291 aaPredicted RBP12.54□□□□□ -0.4
NCLN-201ENST00000246117 CSTBP04080 98 aaKnown RBP12.54□□□□□ -0.4
NCLN-201ENST00000246117 PUDPQ08623 228 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 C1QL3Q5VWW1 255 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 TOMM40LQ969M1 308 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 C8orf44Q96CB5 159 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 NT5DC2Q9H857 520 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 MED29Q9NX70 200 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 TSPAN11A1L157 253 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 ZNF736B4DX44 427 aaPredicted RBP12.54□□□□□ -0.4
NCLN-201ENST00000246117 TEKQ02763 1124 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 GLO1Q04760 184 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 FUT5Q11128 374 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 ZNF770Q6IQ21 691 aaPredicted RBP12.54□□□□□ -0.4
NCLN-201ENST00000246117 TMEM205Q6UW68 189 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 RHOUQ7L0Q8 258 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 TPRA1Q86W33 373 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 BCORP1Q8N888 145 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 OR7G1Q8NGA0 311 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 BAHD1Q8TBE0 780 aaPredicted RBP12.54□□□□□ -0.4
NCLN-201ENST00000246117 BMFQ96LC9 184 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 ABRACLQ9P1F3 81 aa12.54□□□□□ -0.4
NCLN-201ENST00000246117 CCDC163A0A0D9SF12 145 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 DUX1O43812 170 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 CALCBP10092 127 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 CXCL3P19876 107 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 PEBP1P30086 187 aaKnown RBP12.53□□□□□ -0.4
NCLN-201ENST00000246117 SMCO1Q147U7 214 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 DUSP6Q16828 381 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 WDR76Q9H967 626 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 FKRPQ9H9S5 495 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 COPZ2Q9P299 210 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 RHBDD3Q9Y3P4 386 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 OR6C68A6NDL8 312 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 CD34P28906 385 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 RPL18Q07020 188 aaKnown RBP12.53□□□□□ -0.4
NCLN-201ENST00000246117 OPCMLQ14982 345 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 Q499Y3 187 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 C9orf135Q5VTT2 229 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 IDO2Q6ZQW0 420 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 C17orf107Q6ZR85 190 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 TMEM17Q86X19 198 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 CHAC2Q8WUX2 184 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 LPAR4Q99677 370 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 CRB3Q9BUF7 120 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 FGF21Q9NSA1 209 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 COA3Q9Y2R0 106 aaPredicted RBP12.53□□□□□ -0.4
NCLN-201ENST00000246117 SUSD5O60279 629 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
NCLN-201ENST00000246117 WNT1P04628 370 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 PNMTP11086 282 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 PI3P19957 117 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 CDK5R1Q15078 307 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 WDR45BQ5MNZ6 344 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 BPIFB2Q8N4F0 458 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 RELL2Q8NC24 303 aaPredicted RBP12.53□□□□□ -0.4
NCLN-201ENST00000246117 TMEM234Q8WY98 164 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 PGAM5Q96HS1 289 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 FCRL1Q96LA6 429 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 SELENOIQ9C0D9 397 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 ZNF304Q9HCX3 659 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 MLXQ9UH92 298 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 PSME4Q14997 1843 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 CRTAPO75718 401 aaPredicted RBP12.53□□□□□ -0.4
NCLN-201ENST00000246117 ZFPL1O95159 310 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 EPXP11678 715 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 SERTAD2Q14140 314 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 SLC9A3R2Q15599 337 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 ZNF417Q8TAU3 575 aa12.53□□□□□ -0.4
NCLN-201ENST00000246117 PHOSPHO2Q8TCD6 241 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms