RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 RXFP3Q9NSD7 469 aa11.29□□□□□ -0.6
NUP88-201ENST00000225696 MTFP1Q9UDX5 166 aa11.29□□□□□ -0.6
NUP88-201ENST00000225696 IGKV1D-42A0A075B6H8 117 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 HMSDA8MTL9 139 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 KRBOX1C9JBD0 128 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 RAD1O60671 282 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 CDC123O75794 336 aaPredicted RBP11.28□□□□□ -0.6
NUP88-201ENST00000225696 GLCEO94923 617 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 ABHD16AO95870 558 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 APOC3P02656 99 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 CD3DP04234 171 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 F13BP05160 661 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 PPP3CBP16298 524 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 C4BPBP20851 252 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 ACHEP22303 614 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 GK2Q14410 553 aaPredicted RBP11.28□□□□□ -0.6
NUP88-201ENST00000225696 NKAIN2Q5VXU1 208 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 NPSR1Q6W5P4 371 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 GATSQ8NAP1 163 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 RCBTB1Q8NDN9 531 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 PHYHIPQ92561 330 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 ATOH1Q92858 354 aaPredicted RBP11.28□□□□□ -0.6
NUP88-201ENST00000225696 CCDC74AQ96AQ1 378 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 LMF1Q96S06 567 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 AMELYQ99218 206 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 LDAHQ9H6V9 325 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 PFDN2Q9UHV9 154 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 A0A087WUJ7 227 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 F5H5P2 479 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 SDC3O75056 442 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 RBBP9O75884 186 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 RPS21P63220 83 aaKnown RBP11.28□□□□□ -0.6
NUP88-201ENST00000225696 LGALS3BPQ08380 585 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 DMWDQ09019 674 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 ALKBH1Q13686 389 aaKnown RBP11.28□□□□□ -0.6
NUP88-201ENST00000225696 GRM7Q14831 915 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 RBMS2Q15434 407 aaKnown RBP11.28□□□□□ -0.6
NUP88-201ENST00000225696 ETFDHQ16134 617 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 CA13Q8N1Q1 262 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 OR5M9Q8NGP3 310 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 DUSP19Q8WTR2 217 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 PPP1R14AQ96A00 147 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 OR2M4Q96R27 311 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 GAL3ST1Q99999 423 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 DPYSL5Q9BPU6 564 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 WDR76Q9H967 626 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 TMEM138Q9NPI0 162 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 MKKSQ9NPJ1 570 aaPredicted RBP11.28□□□□□ -0.6
NUP88-201ENST00000225696 ZC4H2Q9NQZ6 224 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 SESN1Q9Y6P5 492 aa11.28□□□□□ -0.6
NUP88-201ENST00000225696 GON4LQ3T8J9 2241 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TBC1D3DA0A087WVF3 549 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TBC1D3IA0A087WXS9 549 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TRAV14DV4A0A0A6YYC5 116 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 FAM74A7A6NL05 159 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TBC1D3LB9A6J9 549 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 XRCC3O43542 346 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 RDH16O75452 317 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 CTAG2O75638 210 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 HPP00738 406 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 IFNA16P05015 189 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 ITGA5P08648 1049 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TBC1D3HP0C7X1 549 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 MPGP29372 298 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 ACTR1BP42025 376 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 ACTR1AP61163 376 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.6
NUP88-201ENST00000225696 GPR18Q14330 331 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 UBXN2BQ14CS0 331 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TBC1D3CQ6IPX1 549 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 ENPP7Q6UWV6 458 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 ABHD13Q7L211 337 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 CDH26Q8IXH8 852 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TBC1D3Q8IZP1 549 aaPredicted RBP11.27□□□□□ -0.6
NUP88-201ENST00000225696 PRSS35Q8N3Z0 413 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 NSMAFQ92636 917 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 ADAD1Q96M93 576 aaKnown RBP11.27□□□□□ -0.6
NUP88-201ENST00000225696 FOXN4Q96NZ1 517 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 PLA2G2FQ9BZM2 168 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 EVA1AQ9H8M9 152 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 LYRM4Q9HD34 91 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 FBXL21Q9UKT6 434 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 HRH3Q9Y5N1 445 aa11.27□□□□□ -0.6
NUP88-201ENST00000225696 TRAV18A0A075B6X5 111 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 TRBV5-5A0A0J9YX44 114 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 GGT3PA6NGU5 568 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 ARPC3O15145 178 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 OIP5O43482 229 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 TNFSF14O43557 240 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 AKR7A3O95154 331 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 PLATP00750 562 aa11.27□□□□□ -0.61
NUP88-201ENST00000225696 ANXA2P07355 339 aaKnown RBP11.27□□□□□ -0.61
NUP88-201ENST00000225696 GTF2F2P13984 249 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms