RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 FLI1Q01543 452 aaPredicted RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 BAMBIQ13145 260 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 ERV3-1Q14264 604 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 HFEQ30201 348 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 C3orf33Q6P1S2 294 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 RPL22L1Q6P5R6 122 aaKnown RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 KRT77Q7Z794 578 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 TMEM17Q86X19 198 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 JAGN1Q8N5M9 183 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 ZSCAN1Q8NBB4 408 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 LCN9Q8WX39 176 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 FGF13Q92913 245 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 GLS2Q9UI32 602 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 MDC1Q14676 2089 aaKnown RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 THSD7BQ9C0I4 1608 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 TRAV1-2A0A0B4J238 106 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 SIGLEC6O43699 453 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 CSF2RBP32927 897 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 PBX2P40425 430 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ARFIP1P53367 373 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 FAM53BQ14153 422 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DHCR24Q15392 516 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 PLEKHN1Q494U1 663 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 GALNT16Q8N428 558 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 METTL27Q8N6F8 245 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 PPP1R1CQ8WVI7 109 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ZNF514Q96K75 400 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 MYADMQ96S97 322 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 GAS2L1Q99501 681 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 SLC22A13Q9Y226 551 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 CEP290O15078 2479 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 OR10H2O60403 315 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 PI3P19957 117 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 CNR1P21554 472 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 NPBWR1P48145 328 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 RAG2P55895 527 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ACBD4Q8NC06 268 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 OR2L3Q8NG85 312 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 NUBPLQ8TB37 319 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 LRRC3BQ96PB8 259 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 CMKLR1Q99788 373 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ATXN7L1Q9ULK2 861 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 A0A1B0GW55 424 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 METTL12A8MUP2 240 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DCTN6O00399 190 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ABCD4O14678 606 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 RHOP08100 348 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DUX4L2P0CJ85 424 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DUX4L3P0CJ86 424 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DUX4L4P0CJ87 422 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DUX4L5P0CJ88 424 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DUX4L6P0CJ89 424 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DUX4L7P0CJ90 424 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 SPI1P17947 270 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 PRSS3P35030 304 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 IKZF1Q13422 519 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 SLC22A6Q4U2R8 563 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 PAN3Q58A45 887 aaKnown RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 STEAP1BQ6NZ63 245 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 HSD17B13Q7Z5P4 300 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ARMC10Q8N2F6 343 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 SPICQ8N5J4 248 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 CMBLQ96DG6 245 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ALG12Q9BV10 488 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 RXFP3Q9NSD7 469 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 ZNF223Q9UK11 482 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-201ENST00000224807 MPDZO75970 2070 aa13.09□□□□□ -0.31
SFXN3-201ENST00000224807 COL4A3Q01955 1670 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 TMEM235A6NFC5 223 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
SFXN3-201ENST00000224807 CT62P0C5K7 136 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 OR4E1P0C645 316 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 OR2T7P0C7T2 308 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 MAOBP27338 520 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 CD34P28906 385 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 B2MP61769 119 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 ACTA2P62736 377 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 ACTG2P63267 376 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 PDZK1IP1Q13113 114 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
SFXN3-201ENST00000224807 EIPR1Q53HC9 387 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 FAM209BQ5JX69 171 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 OVCH1Q7RTY7 1134 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 ZNF619Q8N2I2 560 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 OR2T27Q8NH04 317 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 SUSD6Q92537 303 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 KXD1Q9BQD3 176 aa13.08□□□□□ -0.32
SFXN3-201ENST00000224807 TLNRD1Q9H1K6 362 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms