RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ETV6P41212 452 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 KRBOX4Q5JUW0 171 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 WDR5BQ86VZ2 330 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 OR6V1Q8N148 313 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 OR5M1Q8NGP8 315 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 SECTM1Q8WVN6 248 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 FGF14Q92915 247 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 CSF3RQ99062 836 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 MYH7P12883 1935 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 H0YIG0 161 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 H3BMQ9 156 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 ST6GAL1P15907 406 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 GM2AP17900 193 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 HTD2P86397 168 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 COX20Q5RI15 118 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 KMT5CQ86Y97 462 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 LYSMD1Q96S90 227 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 TMEM38AQ9H6F2 299 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 CPNE5Q9HCH3 593 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 TSPAN11A1L157 253 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 FPR3P25089 353 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 CAMK2BQ13554 666 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 C9orf152Q5JTZ5 239 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 PM20D2Q8IYS1 436 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 LILRA2Q8N149 483 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 MVB12AQ96EY5 273 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 OR14A2Q96R54 314 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 SEMA4CQ9C0C4 833 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 IDH3GP51553 393 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 GLYR1Q49A26 553 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 MORN4Q8NDC4 146 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 HRASLS5Q96KN8 279 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 MKRN2Q9H000 416 aaKnown RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 C19orf53Q9UNZ5 99 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 ATP23Q9Y6H3 246 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 LAMB4A4D0S4 1761 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 DSCR3O14972 297 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 SGCEO43556 437 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 HLA-AP01891 365 aaKnown RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 CDK4P11802 303 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 SCGB2A2Q13296 93 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 ILKQ13418 452 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 TRMT12Q53H54 448 aaKnown RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 TMEM196Q5HYL7 178 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 Q6ZTK2 550 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 OR7G2Q8NG99 324 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 INTS12Q96CB8 462 aaKnown RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 EDIL3O43854 480 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 TUSC2O75896 110 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 RAB5BP61020 215 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 BLOC1S1P78537 153 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 B3GLCTQ6Y288 498 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 GHSRQ92847 366 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 C8orf44Q96CB5 159 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 TRIB1Q96RU8 372 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 SMIM3Q9BZL3 60 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 NRIP3Q9NQ35 241 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 MUTYHQ9UIF7 546 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 A6NHS1 94 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 UPK1BO75841 260 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 MT-ND4P03905 459 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 ZDHHC11BP0C7U3 371 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 CR2P20023 1033 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 EDDM3AQ14507 147 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 CCDC28AQ8IWP9 274 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 BBS1Q8NFJ9 593 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 BCL7CQ8WUZ0 217 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-201ENST00000219334 FAM234AQ9H0X4 552 aa17.44■□□□□ 0.38
SMPD3-201ENST00000219334 TPT1P13693 172 aaKnown RBP17.43■□□□□ 0.38
SMPD3-201ENST00000219334 GK2Q14410 553 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-201ENST00000219334 PAN3Q58A45 887 aaKnown RBP17.43■□□□□ 0.38
SMPD3-201ENST00000219334 Q6ZPB1 254 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-201ENST00000219334 RETREG3Q86VR2 466 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 NDUFB7P17568 137 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 ELAVL4P26378 380 aaKnown RBP17.43■□□□□ 0.38
SMPD3-201ENST00000219334 GABRA5P31644 462 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 DLX5P56178 289 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 DUSP5Q16690 384 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 ZNF511Q8NB15 262 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 CCDC74BQ96LY2 380 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 COQ10AQ96MF6 247 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 MYH8P13535 1937 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 MYH9P35579 1960 aaKnown RBP17.43■□□□□ 0.38
SMPD3-201ENST00000219334 EPHA5P54756 1037 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 SLC9A3R2Q15599 337 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.43■□□□□ 0.38
SMPD3-201ENST00000219334 EXD3Q8N9H8 876 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 TMIGD2Q96BF3 282 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 MED18Q9BUE0 208 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 METTL12A8MUP2 240 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 GIFP27352 417 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 OPRL1P41146 370 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 FGFBP1Q14512 234 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 DCXRQ7Z4W1 244 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 ABHD4Q8TB40 342 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 MMP28Q9H239 520 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 ATPIF1Q9UII2 106 aa17.43■□□□□ 0.38
SMPD3-201ENST00000219334 A0A1W2PS29 197 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 TCRBV5S1A1TA0A578 114 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms