RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 LY86O95711 162 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GABRA5P31644 462 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 RORAP35398 523 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 HTR3AP46098 478 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 CTBP2P56545 445 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 CTXN1P60606 82 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ZNF45Q02386 682 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP11-201ENST00000218348 SSPNQ14714 243 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 POU4F3Q15319 338 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 FAM199XQ6PEV8 388 aaPredicted RBP9.06□□□□□ -0.96
USP11-201ENST00000218348 TMEM91Q6ZNR0 172 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 QSOX2Q6ZRP7 698 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 NR2C2APQ86WQ0 139 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 C9orf40Q8IXQ3 194 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 IL17RDQ8NFM7 739 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 NPAS1Q99742 590 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ZNF649Q9BS31 505 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 PPA2Q9H2U2 334 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 UBQLN4Q9NRR5 601 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 PRODH2Q9UF12 536 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GTF2A1LQ9UNN4 478 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 PCDHGA5Q9Y5G8 931 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 OTOGLQ3ZCN5 2332 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 MASP2O00187 686 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 RNF13O43567 381 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 YES1P07947 543 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 MST1P26927 711 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GRK6P43250 576 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ARRB1P49407 418 aaPredicted RBP9.06□□□□□ -0.96
USP11-201ENST00000218348 EXOSC6Q5RKV6 272 aaKnown RBP9.06□□□□□ -0.96
USP11-201ENST00000218348 SLC25A30Q5SVS4 291 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 CNIH2Q6PI25 160 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GID4Q8IVV7 300 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 DUSP19Q8WTR2 217 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 TIMP4Q99727 224 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GTPBP2Q9BX10 602 aaKnown RBP9.06□□□□□ -0.96
USP11-201ENST00000218348 ADGRL4Q9HBW9 690 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GSN-AS1Q9NRJ2 163 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 MUC6Q6W4X9 2439 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 DCTN6O00399 190 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ZNF264O43296 627 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 DDAH2O95865 285 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 HLA-DPB1P04440 258 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 PTAFRP25105 342 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 SERTAD2Q14140 314 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 BTBD16Q32M84 506 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 DDI2Q5TDH0 399 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ZNF544Q6NX49 715 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ZNF574Q6ZN55 896 aaPredicted RBP9.06□□□□□ -0.96
USP11-201ENST00000218348 ESPNLQ6ZVH7 1005 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ZSCAN1Q8NBB4 408 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GPR119Q8TDV5 335 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 GHSRQ92847 366 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 LCORQ96JN0 433 aaPredicted RBP9.06□□□□□ -0.96
USP11-201ENST00000218348 NXF2Q9GZY0 626 aaKnown RBP9.06□□□□□ -0.96
USP11-201ENST00000218348 GALNT9Q9HCQ5 603 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 PARD6AQ9NPB6 346 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 C14orf105Q9NVL8 296 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 ZMIZ1Q9ULJ6 1067 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 VDAC3Q9Y277 283 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 V9GYH0 126 aa9.06□□□□□ -0.96
USP11-201ENST00000218348 SLC22A31A6NKX4 558 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 NPIPB9F8W1W9 429 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SMLR1H3BR10 107 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 CDX4O14627 284 aaPredicted RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF354AO60765 605 aaPredicted RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 IFNGP01579 166 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 HLA-DQA2P01906 255 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 APOA1P02647 267 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF806P0C7X5 589 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 IL7P13232 177 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 GLB1P16278 677 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 CDKN2AP42771 156 aaKnown RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF85Q03923 595 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF117Q03924 483 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 FHL1Q13642 323 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SLC6A19Q695T7 634 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ASB18Q6ZVZ8 466 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF485Q8NCK3 441 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF248Q8NDW4 579 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF680Q8NEM1 530 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 STT3BQ8TCJ2 826 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SAP25Q8TEE9 199 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 HSD17B8Q92506 261 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 YIPF5Q969M3 257 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 WDR77Q9BQA1 342 aaPredicted RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 ESRP2Q9H6T0 727 aaKnown RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 TMEM185BQ9H7F4 350 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 DIABLOQ9NR28 239 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 COPS7AQ9UBW8 275 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 PCDHGB7Q9Y5F8 929 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 IGKV1D-42A0A075B6H8 117 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 A0A087WUJ7 227 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 A0A1B0GWJ7 208 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 H0YIG0 161 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ARHGEF9O43307 516 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SIGLEC6O43699 453 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 CLN5O75503 358 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms