RNA–Protein interactions for RNA: ENST00000215730.11

SNAP29-201, Transcript of synaptosome associated protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP29, Length 4,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-201ENST00000215730 FXYD6-FXYD2A0A087WZ82 144 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 NUPL2O15504 423 aaKnown RBP13.09□□□□□ -0.31
SNAP29-201ENST00000215730 GATBO75879 557 aaKnown RBP13.09□□□□□ -0.31
SNAP29-201ENST00000215730 TCF15Q12870 199 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 OR1Q1Q15612 314 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 PAPD4Q6PIY7 484 aaKnown RBP13.09□□□□□ -0.31
SNAP29-201ENST00000215730 APOOLQ6UXV4 268 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 PRSS42Q7Z5A4 293 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 HGDQ93099 445 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 ARSGQ96EG1 525 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 ZNF578Q96N58 590 aaPredicted RBP13.09□□□□□ -0.31
SNAP29-201ENST00000215730 MS4A4EQ96PG1 132 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 RBP7Q96R05 134 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 ORAI3Q9BRQ5 295 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 FXYD6Q9H0Q3 95 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 MCCC2Q9HCC0 563 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 KLHL9Q9P2J3 617 aa13.09□□□□□ -0.31
SNAP29-201ENST00000215730 TDRD6O60522 2096 aaKnown RBP13.08□□□□□ -0.31
SNAP29-201ENST00000215730 CREBL2O60519 120 aaPredicted RBP13.08□□□□□ -0.31
SNAP29-201ENST00000215730 ZFAND5O76080 213 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 SFTPCP11686 197 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 CD53P19397 219 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 RORAP35398 523 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 THBS2P35442 1172 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 HCCSP53701 268 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 LRRC25Q8N386 305 aaPredicted RBP13.08□□□□□ -0.31
SNAP29-201ENST00000215730 BRIX1Q8TDN6 353 aaKnown RBP13.08□□□□□ -0.31
SNAP29-201ENST00000215730 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 OR14A2Q96R54 314 aa13.08□□□□□ -0.31
SNAP29-201ENST00000215730 PDCD5O14737 125 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 MAKP20794 623 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
SNAP29-201ENST00000215730 LGALS3BPQ08380 585 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 PLCXD2Q0VAA5 305 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 FRRS1Q6ZNA5 592 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 OR52E2Q8NGJ4 325 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 OR6K6Q8NGW6 343 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 COX14Q96I36 57 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 DKKL1Q9UK85 242 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 B3GALT1Q9Y5Z6 326 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 EPXP11678 715 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 PSMB10P40306 273 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 FAM122CQ6P4D5 195 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 LINC01555Q8NAE3 123 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 OR4K13Q8NH42 304 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 S100A16Q96FQ6 103 aaKnown RBP13.08□□□□□ -0.32
SNAP29-201ENST00000215730 C1QTNF6Q9BXI9 259 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 NOX3Q9HBY0 568 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 CMC2Q9NRP2 79 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 SDHAF2Q9NX18 166 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 PCP4L1A6NKN8 68 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 TEX46H3BTG2 121 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 ARPC5O15511 151 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 RP2O75695 350 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 SLC6A6P31641 620 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 LSSP48449 732 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 UBE2NLQ5JXB2 153 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 PDSS1Q5T2R2 415 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 SLC22A18ASQ8N1D0 253 aa13.08□□□□□ -0.32
SNAP29-201ENST00000215730 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
SNAP29-201ENST00000215730 ASCC3Q8N3C0 2202 aaKnown RBP13.07□□□□□ -0.32
SNAP29-201ENST00000215730 ITGA10O75578 1167 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 ACSM4P0C7M7 580 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
SNAP29-201ENST00000215730 PLA2G5P39877 138 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 DYRK1AQ13627 763 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 FIGNL1Q6PIW4 674 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 ALKAL2Q6UX46 152 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 ZNF649Q9BS31 505 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 HEXA-AS1Q9H8Q6 139 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 SERINC1Q9NRX5 453 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 C20orf141Q9NUB4 165 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 COL6A6A6NMZ7 2263 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 A0A1B0GW55 424 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 SCDO00767 359 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 DUX4L2P0CJ85 424 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 DUX4L3P0CJ86 424 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 DUX4L4P0CJ87 422 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 DUX4L5P0CJ88 424 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 DUX4L6P0CJ89 424 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 DUX4L7P0CJ90 424 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 HOXC12P31275 282 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 CCR9P51686 369 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 RAG2P55895 527 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 NNATQ16517 81 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 ZNF658BQ4V348 819 aaPredicted RBP13.07□□□□□ -0.32
SNAP29-201ENST00000215730 MRPL2Q5T653 305 aaKnown RBP13.07□□□□□ -0.32
SNAP29-201ENST00000215730 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 FAM180AQ6UWF9 173 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 ADGRG3Q86Y34 549 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 SMIM4Q8WVI0 70 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 THOC3Q96J01 351 aaKnown RBP13.07□□□□□ -0.32
SNAP29-201ENST00000215730 AIFM2Q9BRQ8 373 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 ARL6Q9H0F7 186 aa13.07□□□□□ -0.32
SNAP29-201ENST00000215730 MED11Q9P086 117 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms