RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Cd38P56528 304 aa13.08□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1359Q7TQU5 313 aa13.08□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r192Q8K4C9 300 aa13.08□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr168Q8VF05 312 aa13.08□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Egln3Q91UZ4 239 aa13.08□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Eif3fQ9DCH4 361 aa13.08□□□□□ -0.32
Col5a1-201ENSMUST00000028280 LipgQ9WVG5 500 aa13.08□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tjp1P39447 1745 aaKnown RBP13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Htra4A2RT60 483 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Aadacl2B2RWD2 401 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Kcnj1O88335 372 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ccr1l1P51676 356 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gabrb3P63080 473 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ikzf1Q03267 517 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Fbxo5Q7TSG3 421 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Znf750Q8BH05 703 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Rab7bQ8VEA8 199 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Mrgpra8Q91ZC4 305 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Bcl3Q9Z2F6 448 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Mtcl1Q3UHU5 1945 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 GlsD3Z7P3 674 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 GzmfP08883 248 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tdpoz1P0DMR5 365 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ssr4Q62186 172 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1389Q8VGX0 311 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tlr1Q9EPQ1 795 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Dclre1aQ9JIC3 1026 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gm3550W4VSN7 160 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Lamb1P02469 1786 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Camta1A2A891 1682 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Aldoart2A6ZI47 364 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Sult2a3D3Z1W5 285 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Zfp457L7N1X4 647 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 St8sia2O35696 375 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 IapP24822 559 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 EvlP70429 414 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Emx1Q04742 257 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr917Q7TRC3 309 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r48Q9EQ52 302 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Fkbp1bQ9Z2I2 108 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Trbv20A0A0B4J1H5 111 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gcm1P70348 436 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Pin1rt1Q3ULQ2 159 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Carnmt1Q80UY1 400 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gpr68Q8BFQ3 365 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 RydenQ8CAK3 290 aaKnown RBP13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Reep4Q8K072 257 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 ManbaQ8K2I4 879 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 NagsQ8R4H7 527 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr633Q8VF02 312 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr788Q8VFI0 311 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 NrarpQ91ZA8 114 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Syt17Q920M7 470 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Oosp1Q925U0 202 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Scgb1b10A0A087WPW0 93 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Zfp937A2ANU7 503 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 BaxQ07813 192 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 PigaQ64323 485 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Arrdc3Q7TPQ9 414 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gpr153Q8K0Z9 631 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Mrgpra3Q91WW3 302 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Nox4Q9JHI8 578 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 9930021J03RikH3BKP8 2027 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Cd300ld4A2A7W1 245 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Thbs1P35441 1170 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 TaglnP37804 201 aaKnown RBP13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Cd300ld3Q6SJQ5 245 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Zfp273Q7M6W8 501 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Zfp85Q7TMC9 473 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tmem200aQ8C817 491 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Sntb1Q99L88 537 aaKnown RBP13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Angpt4Q9WVH6 509 aa13.07□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ttll2A4Q9E4 540 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Catsperg1E9Q355 1151 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Maml2F6U238 1170 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r31L7N2F1 303 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 GcP21614 476 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 CapgP24452 352 aaKnown RBP13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Doc2bP70169 412 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Ctu2Q3U308 514 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Golt1bQ9CR60 138 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Nectin1Q9JKF6 515 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Tns2Q8CGB6 1400 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Trpm6Q8CIR4 2028 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 5830411N06RikB3F5L4 1112 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r159K7N701 305 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 RanP62827 216 aaKnown RBP13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Htr1fQ02284 366 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Grm5Q3UVX5 1203 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Elavl3Q60900 367 aaKnown RBP13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Gtdc1Q8BW56 445 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Vmn1r35Q8R2E2 296 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Abhd3Q91ZH7 411 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Olfr1206A2ATJ9 307 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc38a6G3UVW3 457 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Hoxb13P70321 286 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Cntnap5bQ0V8T8 1292 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Slc37a3Q3TIT8 494 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Taar8cQ5QD05 344 aa13.06□□□□□ -0.32
Col5a1-201ENSMUST00000028280 Nol4lQ6DIB4 494 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms