RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Prl8a2O54832 240 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Nipsnap1O55125 284 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Cops3O88543 423 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 PrkcaP20444 672 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Gsx2P31316 305 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Sez6Q7TSK2 991 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Otop1Q80VM9 600 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Spata33Q8C624 132 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Amdhd2Q8JZV7 409 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Slc38a1Q8K2P7 485 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 SgtbQ8VD33 304 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Pcdhb20Q91XZ9 799 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Dennd6bQ9D9V7 585 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Keg1Q9DCY0 295 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Mmp1bQ9EPL6 463 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Nkx2-4Q9EQM3 354 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Atg2bQ80XK6 2075 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Zfp345A2AQA1 561 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Aldh3b2E9Q3E1 479 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 CatsperdE9Q9F6 805 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 H2-M11F6U8V3 335 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Gm21812J3QN84 227 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 OtpO09113 325 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Ccl4P14097 92 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Il13P20109 131 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Art5P70352 309 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Tmprss11bQ14C59 416 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Sidt1Q6AXF6 827 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Klhl6Q6V595 619 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Abhd16bQ80YU0 474 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Rfc3Q8R323 356 aaKnown RBP15.07■□□□□ 0
Shh-201ENSMUST00000002708 Eps8l3Q91WL0 600 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Exosc4Q921I9 245 aaKnown RBP15.07■□□□□ 0
Shh-201ENSMUST00000002708 Ier3ip1Q9CR20 82 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Arv1Q9D0U9 266 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Cldnd2Q9D9H2 167 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Asah1Q9WV54 394 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 SptbP15508 2128 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Gm5286E0CXI6 357 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Fbxw24E9PXM9 466 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Vmn2r69G3XA45 850 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Slc16a5G5E8K6 468 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Dbil5O09035 87 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Kcns1O35173 497 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Tacr1P30548 407 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Mmp2P33434 662 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Aqp2P56402 271 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Znf488Q5HZG9 337 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 NnatQ61979 81 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Tbccd1Q640P7 552 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 N6amt1Q6SKR2 214 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Olfr835Q7TRG7 311 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Fbxo34Q80XI1 695 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Flrt2Q8BLU0 660 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Q8BPC6 396 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Mrgpra1Q91WW5 304 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Mrgprb3Q91ZC1 312 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Mrm1Q99J25 320 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Tmem38bQ9DAV9 292 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Olfr971Q9EQ96 307 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Adam18Q9R157 719 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Spaca5A2AE20 160 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Slc25a25A2ASZ8 469 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Lao1B1ARV3 523 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Wscd2D4PHA7 571 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Gm20683H3BKJ1 410 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Zfp616J3QN14 987 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 LplP11152 474 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Cd48P18181 240 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Hoxc4Q08624 264 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Nxpe2Q3U095 558 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 FcrlbQ5DRQ8 427 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 4930438A08RikQ5SPH3 536 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Muc19Q6JHY2 733 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Hsh2dQ6VYH9 334 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Olfr1463Q7TQR3 310 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Cpt1cQ8BGD5 798 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Dusp28Q8BTR5 163 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Fam221aQ8C790 301 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 HinfpQ8K1K9 503 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Mmp21Q8K3F2 568 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Med31Q9CXU1 131 aaKnown RBP15.06■□□□□ 0
Shh-201ENSMUST00000002708 Obp1aQ9D3H2 163 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Derl3Q9D8K3 228 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Isyna1Q9JHU9 557 aa15.06■□□□□ 0
Shh-201ENSMUST00000002708 Olfr152G3X9L8 316 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Olfr741L7N1Y5 311 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Tmco2P0C1V4 183 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Tnfrsf4P47741 272 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Clec10aP49300 304 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 S100a11P50543 98 aaKnown RBP15.05■□□□□ 0
Shh-201ENSMUST00000002708 Tspan5P62080 268 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Fam71f1Q3UZD7 341 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Klri2Q5DT36 248 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Zfp82Q6P9Y7 530 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Eml2Q7TNG5 649 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Olfr198Q7TS40 306 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Adam30Q811Q3 732 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Muc20Q8BUE7 656 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Fgd2Q8BY35 655 aa15.05■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms