RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TXNDC12O95881 172 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 BCL10O95999 233 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 PLGP00747 810 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 POU1F1P28069 291 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 RPL27P61353 136 aaKnown RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 POU3F1Q03052 451 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 PMPCAQ10713 525 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 GINS1Q14691 196 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 PTGES3Q15185 160 aaKnown RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 SNCBQ16143 134 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 TMEM201Q5SNT2 666 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 GPR139Q6DWJ6 353 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 C3P1Q6ZMU1 363 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 LNX2Q8N448 690 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 OR2T33Q8NG76 320 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 OR8D4Q8NGM9 314 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 TXNDC15Q96J42 360 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 ADAD1Q96M93 576 aaKnown RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 DMRTA2Q96SC8 542 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 KATNB1Q9BVA0 655 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 IFT27Q9BW83 186 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 SMPD3Q9NY59 655 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 IER3IP1Q9Y5U9 82 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 SPTA1P02549 2419 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ZNF726A6NNF4 738 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ZAR1LA6NP61 321 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 HSPB2A8KAH6 182 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 CENPBD1B2RD01 187 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 E9PQ18 207 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 DLGAP1O14490 977 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 BHLHE40O14503 412 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 TRAF3IP2O43734 574 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 AKAP8O43823 692 aaKnown RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 SNAP29O95721 258 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 HMGN1P05114 100 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 IFNGR1P15260 489 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 GNLYP22749 145 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 CTSSP25774 331 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 POLR2IP36954 125 aaKnown RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 VHLP40337 213 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 DAP3P51398 398 aaKnown RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 SMSP52788 366 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 PER3P56645 1201 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 CLDN17P56750 224 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ERVK-25P63136 954 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 HSPB2Q16082 182 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ACKR1Q16570 336 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ZIK1Q3SY52 487 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ARMC4Q5T2S8 1044 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 FAM205BPQ63HN1 556 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ACSM5Q6NUN0 579 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 SLC27A4Q6P1M0 643 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 FAM214BQ7L5A3 538 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 AAED1Q7RTV5 226 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 FAM122BQ7Z309 247 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 HDDC2Q7Z4H3 204 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 RPRMLQ8N4K4 120 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ARIH2OSQ8N7S6 290 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 OR6X1Q8NH79 312 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 INTS12Q96CB8 462 aaKnown RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ERMAPQ96PL5 475 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 TEX12Q9BXU0 123 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 POLDIP3Q9BY77 421 aaKnown RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 GRIP2Q9C0E4 1043 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 TOR3AQ9H497 397 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 RIBC2Q9H4K1 309 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 SLC25A19Q9HC21 320 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 GRHPRQ9UBQ7 328 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 SH3BGRL2Q9UJC5 107 aa10.94□□□□□ -0.66
LINC00339-213ENST00000642137 NOSIPQ9Y314 301 aaKnown RBP10.94□□□□□ -0.66
LINC00339-213ENST00000642137 ESPL1Q14674 2120 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 SLC35F4A4IF30 521 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 A6NIZ1 184 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 CCL21O00585 134 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 SLC16A6O15403 523 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 AHCYL1O43865 530 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 MRPL33O75394 65 aaKnown RBP10.93□□□□□ -0.66
LINC00339-213ENST00000642137 SERPINI2O75830 405 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 ZNF432O94892 652 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 IL18BPO95998 194 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 TMIGD3P0DMS9 266 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-213ENST00000642137 ACADSP16219 412 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 NOS3P29474 1203 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 AGTR1P30556 359 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 SDHAP31040 664 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 NTF4P34130 210 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 GRK5P34947 590 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 ACVR1BP36896 505 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 KIR2DL2P43627 348 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-213ENST00000642137 BIDP55957 195 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 RAP1BP61224 184 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 RAP1AP62834 184 aa10.93□□□□□ -0.66
LINC00339-213ENST00000642137 MYBPC1Q00872 1141 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms