RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ZFAND2BQ8WV99 257 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 SH3YL1Q96HL8 342 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ERMAPQ96PL5 475 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 MGLLQ99685 303 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 FUNDC2Q9BWH2 189 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 TAPBPLQ9BX59 468 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ANGPTL4Q9BY76 406 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ZNF552Q9H707 407 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 MCCC2Q9HCC0 563 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 AMBNQ9NP70 447 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 P4HTMQ9NXG6 502 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 CHRNA9Q9UGM1 479 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 FBXL4Q9UKA2 621 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ZNF469Q96JG9 3925 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 MAP1AP78559 2803 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 HEATR5AQ86XA9 2040 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 CENPBD1B2RD01 187 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 LINC01387J3KSC0 135 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 NPIPB7O75200 414 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 SCG5P05408 212 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 IGFBP1P08833 259 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 ADORA3P0DMS8 318 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 CD36P16671 472 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 CD53P19397 219 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 PSMA1P25786 263 aaKnown RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 UGT2B10P36537 528 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 SLC25A1P53007 311 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 NUDT6P53370 316 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 GP2P55259 537 aaKnown RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 WNT4P56705 351 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 TAS2R43P59537 309 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 LSM11P83369 360 aaKnown RBP eCLIP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 ZP4Q12836 540 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 MRPL28Q13084 256 aaKnown RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 SLC46A3Q7Z3Q1 461 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 CPOQ8IVL8 374 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 ACBD7Q8N6N7 88 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 OR4K17Q8NGC6 315 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 OR5J2Q8NH18 312 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 NMD3Q96D46 503 aaKnown RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 YIPF6Q96EC8 236 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 TMEM41AQ96HV5 264 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 ZNF160Q9HCG1 818 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 TNFRSF10DQ9UBN6 386 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 GRHPRQ9UBQ7 328 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 CAB39Q9Y376 341 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 MRPS18CQ9Y3D5 142 aaKnown RBP15.5■□□□□ 0.07
PHGDH-234ENST00000642041 NOX1Q9Y5S8 564 aa15.5■□□□□ 0.07
PHGDH-234ENST00000642041 ACANP16112 2415 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 IGKV1D-42A0A075B6H8 117 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 GJE1A6NN92 205 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 H3BMQ9 156 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 SUSD5O60279 629 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 CBR3O75828 277 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 INMTO95050 263 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 BCL10O95999 233 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 PRKCAP17252 672 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 GALP22466 123 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 SDHAP31040 664 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 MASP1P48740 699 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 AIMP2Q13155 320 aaKnown RBP15.49■□□□□ 0.07
PHGDH-234ENST00000642041 LSAMPQ13449 338 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 MED22Q15528 200 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 TRAM1Q15629 374 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 NDUFAF6Q330K2 333 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 ARMCX4Q5H9R4 360 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 C1orf140Q5VVS0 124 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 JAZF1Q86VZ6 243 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 ADGRG3Q86Y34 549 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 PLCZ1Q86YW0 608 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 KLHL36Q8N4N3 616 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 ZNF808Q8N4W9 903 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-234ENST00000642041 ADPRHL1Q8NDY3 354 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 KBTBD8Q8NFY9 601 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 OR52I1Q8NGK6 324 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 FNDC8Q8TC99 324 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 THAP3Q8WTV1 239 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-234ENST00000642041 NANOS1Q8WY41 292 aaKnown RBP15.49■□□□□ 0.07
PHGDH-234ENST00000642041 LGALS12Q96DT0 336 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 MESP1Q9BRJ9 268 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 TMUB1Q9BVT8 246 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 CDCP1Q9H5V8 836 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 FANCFQ9NPI8 374 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 MRPL39Q9NYK5 338 aaKnown RBP15.49■□□□□ 0.07
PHGDH-234ENST00000642041 B3GALT5Q9Y2C3 310 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 HDGFL3Q9Y3E1 203 aa15.49■□□□□ 0.07
PHGDH-234ENST00000642041 TRAV27A0A087WT01 109 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 A6NIZ1 184 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 AKAP8O43823 692 aaKnown RBP15.48■□□□□ 0.07
PHGDH-234ENST00000642041 FZD7O75084 574 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 RENP00797 406 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 IGHA1P01876 353 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 P04436 131 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 NR2C1P13056 603 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 CD99P14209 185 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 UQCRC1P31930 480 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 RGS6P49758 472 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 DSCR4P56555 118 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-234ENST00000642041 FXYD6P3P58550 94 aa15.48■□□□□ 0.07
PHGDH-234ENST00000642041 RAP1BP61224 184 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms