RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 OMA1Q96E52 524 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 RADILQ96JH8 1075 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 LCORQ96JN0 433 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-233ENST00000642021 KLHDC3Q9BQ90 382 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 GSX2Q9BZM3 304 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 SRA1Q9HD15 236 aaKnown RBP12.6□□□□□ -0.39
PHGDH-233ENST00000642021 RXFP3Q9NSD7 469 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 POMT2Q9UKY4 750 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 CLDN16Q9Y5I7 305 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 FANCMQ8IYD8 2048 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 SERINC4A6NH21 518 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 B8ZZF3 427 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 H0YC42 278 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 H7C1C5 153 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 OIP5O43482 229 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 EGFP01133 1207 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 RRASP10301 218 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 LCN6P62502 163 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.39
PHGDH-233ENST00000642021 OPCMLQ14982 345 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 MANEAQ5SRI9 462 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 NHLRC1Q6VVB1 395 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 BCORP1Q8N888 145 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 OR52B4Q8NGK2 314 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 THEM6Q8WUY1 208 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 SCPEP1Q9HB40 452 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 TAS2R10Q9NYW0 307 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF69Q9UC07 566 aa12.6□□□□□ -0.39
PHGDH-233ENST00000642021 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 TVP23AA6NH52 213 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 LINC01565O15544 149 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 PRAF2O60831 178 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 F13BP05160 661 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 ODF4Q2M2E3 257 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 OTPQ5XKR4 325 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 CHMP1BQ7LBR1 199 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 FAM122BQ7Z309 247 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
PHGDH-233ENST00000642021 UXS1Q8NBZ7 420 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 OR51A4Q8NGJ6 313 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 C16orf52Q8NHV5 167 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 SLC37A2Q8TED4 501 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 ASB12Q8WXK4 309 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 MRGPRX1Q96LB2 322 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 SFXN2Q96NB2 322 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 EVA1AQ9H8M9 152 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 EMC3Q9P0I2 261 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 AKAP7Q9P0M2 348 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-233ENST00000642021 FKBP7Q9Y680 259 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 GON4LQ3T8J9 2241 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 CACNA1CQ13936 2221 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 PLSCR5A0PG75 271 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 NAP1L6A6NFF2 107 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 EFCAB7A8K855 629 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 IFI6P09912 130 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 HNRNPA2B1P22626 353 aaKnown RBP12.59□□□□□ -0.39
PHGDH-233ENST00000642021 TAS2R20P59543 309 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 LTBQ06643 244 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 CBFBQ13951 182 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 OR5M10Q6IEU7 315 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 Q6ZSR6 202 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 OR6V1Q8N148 313 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 EXD3Q8N9H8 876 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 AVL9Q8NBF6 648 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 WBP1Q96G27 269 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 ADAD1Q96M93 576 aaKnown RBP12.59□□□□□ -0.39
PHGDH-233ENST00000642021 TCF7L1Q9HCS4 588 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 ZNF224Q9NZL3 707 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 MAB21L2Q9Y586 359 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 TICRRQ7Z2Z1 1910 aa12.59□□□□□ -0.39
PHGDH-233ENST00000642021 A0A1W2PPL8 197 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 ITGA10O75578 1167 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 PPM1BO75688 479 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 GPANK1O95872 356 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 MAS1P04201 325 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 IFNGR1P15260 489 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 POU3F2P20265 443 aaPredicted RBP12.58□□□□□ -0.39
PHGDH-233ENST00000642021 ART1P52961 327 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 UBE2IP63279 158 aaKnown RBP12.58□□□□□ -0.39
PHGDH-233ENST00000642021 KCNAB1Q14722 419 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 CD226Q15762 336 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 Q499Y3 187 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 OLFML2AQ68BL7 652 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 LRRTM1Q86UE6 522 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 LRRC75AQ8NAA5 344 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 OR8K3Q8NH51 312 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 MIB2Q96AX9 1013 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 ELSPBP1Q96BH3 223 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 ELMOD3Q96FG2 381 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 OR1F2PQ96R84 312 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 Q9N2J8 555 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 TAS2R5Q9NYW4 299 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 FBXL3Q9UKT7 428 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 ERVK-19Q9WJR5 959 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.39
PHGDH-233ENST00000642021 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.4
PHGDH-233ENST00000642021 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms