RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SNAP29O95721 258 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 TP53P04637 393 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-228ENST00000641847 HIST1H2ABP04908 130 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 IGFBP1P08833 259 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-228ENST00000641847 POU1F1P28069 291 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 KIR2DL3P43628 341 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 CLDN15P56746 228 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 RPS3AP61247 264 aaKnown RBP8.38□□□□□ -1.07
PHGDH-228ENST00000641847 CSNK2A1P68400 391 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SLC35A1P78382 337 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SRYQ05066 204 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 COX10Q12887 443 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SGCBQ16585 318 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 DEFB113Q30KQ7 82 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 RFX4Q33E94 735 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 ZIK1Q3SY52 487 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SLC36A3Q495N2 470 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 ZBED5Q49AG3 693 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 PDSS1Q5T2R2 415 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 ARHGAP11AQ6P4F7 1023 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SMARCD3Q6STE5 483 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 RASSF6Q6ZTQ3 369 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 HIST3H2AQ7L7L0 130 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 CLDN22Q8N7P3 220 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SCAIQ8N9R8 606 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 OR5J2Q8NH18 312 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 OR10D3Q8NH80 312 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 TEX47Q8TBZ9 253 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 HIST1H2ACQ93077 130 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SARAFQ96BY9 339 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 ZHX1-C8orf76Q96EF9 292 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 LRRC46Q96FV0 321 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 WDYHV1Q96HA8 205 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 RDH12Q96NR8 316 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 TIMP4Q99727 224 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 PLA2G12AQ9BZM1 189 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 NDEL1Q9GZM8 345 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 EGLN3Q9H6Z9 239 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 RASSF1Q9NS23 344 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 MRPL39Q9NYK5 338 aaKnown RBP8.38□□□□□ -1.07
PHGDH-228ENST00000641847 REV1Q9UBZ9 1251 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 CAMK2AQ9UQM7 478 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 SIGLEC7Q9Y286 467 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 TRAPPC4Q9Y296 219 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 HIF3AQ9Y2N7 669 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 KIAA1549Q9HCM3 1950 aa8.38□□□□□ -1.07
PHGDH-228ENST00000641847 IGHV3-15A0A0B4J1V0 119 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 A0A1W2PNV4 684 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 NPIPA2E9PIF3 369 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 NPIPA3F8WFD2 350 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 H0YJX3 145 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 BLOC1S5-TXNDC5H3BN57 136 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ZNHIT1O43257 154 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 DNPH1O43598 174 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 PTP4A3O75365 173 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 NDUFB2O95178 105 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 RCBTB2O95199 551 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 OR6A2O95222 327 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 LY6G6DO95868 133 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 CPN1P15169 458 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ENPP1P22413 925 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 SLC6A6P31641 620 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 UQCRC1P31930 480 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 AQP2P41181 271 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 RAC3P60763 192 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ESRRGP62508 458 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 RPL18Q07020 188 aaKnown RBP8.37□□□□□ -1.07
PHGDH-228ENST00000641847 PMPCAQ10713 525 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 PMS2P3Q13401 168 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 FHL1Q13642 323 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 TAF11Q15544 211 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF239Q16600 458 aaKnown RBP8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ANKDD1AQ495B1 522 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ALG10Q5BKT4 473 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 CLEC12AQ5QGZ9 265 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 SHEQ5VZ18 495 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 RPL13AP3Q6NVV1 102 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 PAMR1Q6UXH9 720 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 THSD4Q6ZMP0 1018 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 FGD2Q7Z6J4 655 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 IGFN1Q86VF2 1251 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 CDC20BQ86Y33 519 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 CCDC71Q8IV32 467 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-228ENST00000641847 IQCF1Q8N6M8 205 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 TMEM99Q8N816 258 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ADPRHL1Q8NDY3 354 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF555Q8NEP9 628 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 OR52L1Q8NGH7 329 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 OR8D4Q8NGM9 314 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 MOSPD2Q8NHP6 518 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 CYGBQ8WWM9 190 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 OSTF1Q92882 214 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 CPNE4Q96A23 557 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF845Q96IR2 970 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-228ENST00000641847 SAMD8Q96LT4 415 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF570Q96NI8 536 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 TNFRSF13CQ96RJ3 184 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF184Q99676 751 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-228ENST00000641847 ADI1Q9BV57 179 aa8.37□□□□□ -1.07
PHGDH-228ENST00000641847 PRDM14Q9GZV8 571 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms