RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 STK32CQ86UX6 486 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 UBE2J2Q8N2K1 259 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 LINC00471Q8N535 108 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 AQP11Q8NBQ7 271 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 OR10G2Q8NGC3 310 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 GNPDA2Q8TDQ7 276 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 GIPC3Q8TF64 312 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 RNASE6Q93091 150 aaKnown RBP11.67□□□□□ -0.54
GTF3A-209ENST00000640289 ENKD1Q9H0I2 346 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 INIPQ9NRY2 104 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 SLC7A10Q9NS82 523 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 PARPBPQ9NWS1 579 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 PDP1Q9P0J1 537 aaPredicted RBP11.67□□□□□ -0.54
GTF3A-209ENST00000640289 IL20RAQ9UHF4 553 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 MAGED1Q9Y5V3 778 aaPredicted RBP11.67□□□□□ -0.54
GTF3A-209ENST00000640289 A0A1W2PRG6 482 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 DEAF1O75398 565 aaPredicted RBP11.66□□□□□ -0.54
GTF3A-209ENST00000640289 UPK3AO75631 287 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 ADAP00813 363 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 PRKACGP22612 351 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 FPR3P25089 353 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 FASP25445 335 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 CCKARP32238 428 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 IFNGR2P38484 337 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 CD79BP40259 229 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 CTXN1P60606 82 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 PRPS1P60891 318 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 TSPAN31Q12999 210 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 CAMK2DQ13557 499 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 GK3PQ14409 553 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 ACKR1Q16570 336 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 FBXW9Q5XUX1 488 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 ANKRD34AQ69YU3 496 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 CXorf67Q86X51 503 aaPredicted RBP11.66□□□□□ -0.54
GTF3A-209ENST00000640289 TMEM123Q8N131 208 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 GABRG1Q8N1C3 465 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 GTPBP3Q969Y2 492 aaKnown RBP11.66□□□□□ -0.54
GTF3A-209ENST00000640289 OR2M2Q96R28 347 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 NIPSNAP1Q9BPW8 284 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 SEMA6AQ9H2E6 1030 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 SLCO5A1Q9H2Y9 848 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 UPB1Q9UBR1 384 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 RCE1Q9Y256 329 aa11.66□□□□□ -0.54
GTF3A-209ENST00000640289 AKAP8O43823 692 aaKnown RBP11.65□□□□□ -0.54
GTF3A-209ENST00000640289 SLC43A1O75387 559 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 NDUFB2O95178 105 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 BCL10O95999 233 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 IGHV1-2P23083 117 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 RUNX1T1Q06455 604 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 FAPQ12884 760 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 TOP3AQ13472 1001 aaPredicted RBP11.65□□□□□ -0.54
GTF3A-209ENST00000640289 ANKDD1AQ495B1 522 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 PHYHD1Q5SRE7 291 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 C9orf135Q5VTT2 229 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 STAC2Q6ZMT1 411 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 Q6ZT83 130 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 LINGO2Q7L985 606 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 FANK1Q8TC84 345 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 LRRC46Q96FV0 321 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 ALKBH3Q96Q83 286 aaPredicted RBP11.65□□□□□ -0.54
GTF3A-209ENST00000640289 TSPAN32Q96QS1 320 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 FEVQ99581 238 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 PKP2Q99959 881 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 OR52D1Q9H346 318 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 ELOVL5Q9NYP7 299 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 MALT1Q9UDY8 824 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 PLEKHB1Q9UF11 243 aaPredicted RBP11.65□□□□□ -0.54
GTF3A-209ENST00000640289 ZNF346Q9UL40 294 aaKnown RBP11.65□□□□□ -0.54
GTF3A-209ENST00000640289 ADAM18Q9Y3Q7 739 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 DIDO1Q9BTC0 2240 aaKnown RBP11.65□□□□□ -0.54
GTF3A-209ENST00000640289 TENM4Q6N022 2769 aa11.65□□□□□ -0.54
GTF3A-209ENST00000640289 ZNF726A6NNF4 738 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 LYZL6O75951 148 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 IGFBP1P08833 259 aaPredicted RBP11.64□□□□□ -0.55
GTF3A-209ENST00000640289 FCGR1AP12314 374 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 RPL4P36578 427 aaKnown RBP11.64□□□□□ -0.55
GTF3A-209ENST00000640289 ERVK-25P63136 954 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
GTF3A-209ENST00000640289 ZFP1Q6P2D0 407 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 SHQ1Q6PI26 577 aaKnown RBP11.64□□□□□ -0.55
GTF3A-209ENST00000640289 SMARCD3Q6STE5 483 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF620Q6ZNG0 422 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 KIF18BQ86Y91 864 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 POMGNT2Q8NAT1 580 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 OR5K1Q8NHB7 308 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 LINC01560Q8TB33 94 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 ASB10Q8WXI3 467 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 ADAD1Q96M93 576 aaKnown RBP11.64□□□□□ -0.55
GTF3A-209ENST00000640289 BDH2Q9BUT1 245 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 KATNB1Q9BVA0 655 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 DGCR6LQ9BY27 220 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 POLDIP3Q9BY77 421 aaKnown RBP11.64□□□□□ -0.55
GTF3A-209ENST00000640289 PLA2G12AQ9BZM1 189 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 TXNIPQ9H3M7 391 aa11.64□□□□□ -0.55
GTF3A-209ENST00000640289 S100A14Q9HCY8 104 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms