RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 NKX3-1Q99801 234 aaPredicted RBP13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 PPA2Q9H2U2 334 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 CDCP1Q9H5V8 836 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 MBNL1Q9NR56 388 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 GNG12Q9UBI6 72 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 MSTNO14793 375 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 MED6O75586 246 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 CHRNB1P11230 501 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 F2RL1P55085 397 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 DPY19L2P2Q6ZN68 376 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 NIPSNAP1Q9BPW8 284 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 NT5DC2Q9H857 520 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 HRASLSQ9HDD0 168 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 ZNF225Q9UK10 706 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 RPH3ALQ9UNE2 315 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 EDIL3O43854 480 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 CTNSO60931 367 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 TSFMP43897 325 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 ILKQ13418 452 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 RBMS2Q15434 407 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 ENTHD1Q8IYW4 607 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 OR52I1Q8NGK6 324 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 MRPL38Q96DV4 380 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 AMBRA1Q9C0C7 1298 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 SAGE1Q9NXZ1 904 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 MMACHCQ9Y4U1 282 aa13.6□□□□□ -0.23
HNRNPU-226ENST00000640218 IGLV3-10A0A075B6K4 115 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 TPMTP51580 245 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 ACTBL2Q562R1 376 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 ESCO2Q56NI9 601 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 PAN3Q58A45 887 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 RBMXL1Q96E39 390 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 PADI1Q9ULC6 663 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 CSO75390 466 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 SCG5P05408 212 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 OMGP23515 440 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 RACK1P63244 317 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 CLVS2Q5SYC1 327 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 MAVSQ7Z434 540 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 OR6T1Q8NGN1 323 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 TCTEX1D2Q8WW35 142 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 RASD2Q96D21 266 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 C12orf49Q9H741 205 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 MYOTQ9UBF9 498 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 DUSP13Q9UII6 198 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 ZNF587BE7ETH6 402 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 IRS1P35568 1242 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 METTL17Q9H7H0 456 aaPredicted RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 TXNL4BQ9NX01 149 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 TMEM202A6NGA9 273 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 POM121CA8CG34 1229 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 POU2F2P09086 479 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 UBBP0CG47 229 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 UBCP0CG48 685 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 PTAFRP25105 342 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 LIM2P55344 173 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 GABREP78334 506 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 CATR1Q13166 79 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 ZNF454Q8N9F8 522 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 COPS3Q9UNS2 423 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 GON4LQ3T8J9 2241 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 SNRNP70P08621 437 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 NFYAP23511 347 aaPredicted RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 HTR1FP30939 366 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 FGGYQ96C11 551 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 DAZAP1Q96EP5 407 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 CENPOQ9BU64 300 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 SNX11Q9Y5W9 270 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 HS3ST3A1Q9Y663 406 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 R4GN57 208 aa13.59□□□□□ -0.23
HNRNPU-226ENST00000640218 IGHV3-20A0A0C4DH32 117 aa13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 ADAM23O75077 832 aa13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 GDNFP39905 211 aa13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 SFXN4Q6P4A7 337 aa13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 Q6ZTK2 550 aa13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 RHOXF1Q8NHV9 184 aa13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 RANGRFQ9HD47 186 aaPredicted RBP13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 GPATCH2Q9NW75 528 aa13.58□□□□□ -0.23
HNRNPU-226ENST00000640218 K7EPK0 472 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 CR2P20023 1033 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 C9orf152Q5JTZ5 239 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 FAM71E2Q8N5Q1 922 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 SLC16A11Q8NCK7 471 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 OR5M1Q8NGP8 315 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 DECR2Q9NUI1 292 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 ALKBH1Q13686 389 aaKnown RBP13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 OR8B8Q15620 311 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 Q499Y3 187 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 MFSD12Q6NUT3 480 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 RDH10Q8IZV5 341 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 ZNF511Q8NB15 262 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 KIR3DX1Q9H7L2 352 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 C1orf123Q9NWV4 160 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 TRGV8A0A0C4DH27 118 aa13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 EIF1BO60739 113 aaKnown RBP13.58□□□□□ -0.24
HNRNPU-226ENST00000640218 RPS27AP62979 156 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms