RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 STT3BQ8TCJ2 826 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 PIGCQ92535 297 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 C8orf44Q96CB5 159 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 C11orf54Q9H0W9 315 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 NEU3Q9UQ49 428 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 CORINQ9Y5Q5 1042 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 F5H5P2 479 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 GABRG2P18507 467 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 MTNR1BP49286 362 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 SEC61A1P61619 476 aaKnown RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 DUSP8Q13202 625 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 TMEM201Q5SNT2 666 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 LIPNQ5VXI9 398 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF547Q8IVP9 402 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 BPIFB2Q8N4F0 458 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 BBS1Q8NFJ9 593 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 CCDC74AQ96AQ1 378 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 TSSK2Q96PF2 358 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 SYT3Q9BQG1 590 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 SLC6A14Q9UN76 642 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 ANKRD61A6NGH8 418 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 PRAF2O60831 178 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 FUCA1P04066 466 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 HIST1H1CP16403 213 aaKnown RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 TCN2P20062 427 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 HYAL1Q12794 435 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 NIPAL3Q6P499 406 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 LRRC69Q6ZNQ3 347 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 LYSMD2Q8IV50 215 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 CNEP1R1Q8N9A8 125 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 OR7G1Q8NGA0 311 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF845Q96IR2 970 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 TSNAXQ99598 290 aaKnown RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 DNTTIP1Q9H147 329 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 ACKR4Q9NPB9 350 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 NPFFR2Q9Y5X5 522 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 SRFP11831 508 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SSR4P51571 173 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 WNT3P56703 355 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 KCNJ8Q15842 424 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 OTPQ5XKR4 325 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 FAHD1Q6P587 224 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 UNQ6126/PRO20091Q6UXV3 157 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 CALHM3Q86XJ0 350 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 PDZD9Q8IXQ8 264 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 CA13Q8N1Q1 262 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 OR5M1Q8NGP8 315 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SLC2A12Q8TD20 617 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 ZC3H10Q96K80 434 aaKnown RBP13.19□□□□□ -0.3
SCARB2-208ENST00000638372 GABARAPL1Q9H0R8 117 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 TMEM129A0AVI4 362 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SLC33A1O00400 549 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-208ENST00000638372 GAPDHSO14556 408 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-208ENST00000638372 MRPL33O75394 65 aaKnown RBP13.19□□□□□ -0.3
SCARB2-208ENST00000638372 RGS19P49795 217 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 PPA1Q15181 289 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SYT9Q86SS6 491 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 BCORP1Q8N888 145 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 OR11A1Q9GZK7 315 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SLC38A1Q9H2H9 487 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 ARFGEF1Q9Y6D6 1849 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 M0R082 166 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 P2RY10O00398 339 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 AKR7A3O95154 331 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 HRGP04196 525 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 CAPZBP47756 277 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 FOXK1P85037 733 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF793Q6ZN11 406 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 AAED1Q7RTV5 226 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SLC16A14Q7RTX9 510 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 CMIPQ8IY22 773 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 LINC01555Q8NAE3 123 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 PLPP7Q8NBV4 271 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 RRNAD1Q96FB5 475 aaKnown RBP13.19□□□□□ -0.3
SCARB2-208ENST00000638372 HINT2Q9BX68 163 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SIRT5Q9NXA8 310 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 COQ3Q9NZJ6 369 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 LSM5Q9Y4Y9 91 aaKnown RBP13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SPTBP11277 2137 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 TRIM64CA6NLI5 447 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 GLCEO94923 617 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 VEGFCP49767 419 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 DLX5P56178 289 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 ALKBH1Q13686 389 aaKnown RBP13.19□□□□□ -0.3
SCARB2-208ENST00000638372 MISPQ8IVT2 679 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 SNAPC3Q92966 411 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 GIMAP5Q96F15 307 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 RTTNQ86VV8 2226 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
SCARB2-208ENST00000638372 COL11A2P13942 1736 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 HTR5AP47898 357 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 RAE1P78406 368 aaKnown RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 Q6ZNX1 250 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 GLB1L2Q8IW92 636 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 OR4M1Q8NGD0 313 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms