RNA–Protein interactions for RNA: ENST00000637050.1

CLN3-254, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 1,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-254ENST00000637050 ADRB1P08588 477 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 ID4P47928 161 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 CD97P48960 835 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 SLC25A1P53007 311 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 CLDN20P56880 219 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 CSNK2A1P68400 391 aaPredicted RBP16.5■□□□□ 0.23
CLN3-254ENST00000637050 KLHL12Q53G59 568 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 RNLSQ5VYX0 342 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 B3GNT6Q6ZMB0 384 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 ADCK1Q86TW2 530 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 OR9Q1Q8NGQ5 310 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 MUL1Q969V5 352 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 SNX18Q96RF0 628 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 TUBA1CQ9BQE3 449 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 OR51V1Q9H2C8 321 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 LOC102725191A0A1B0GVB3 256 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 TNFSF11O14788 317 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 RRP8O43159 456 aaKnown RBP16.5■□□□□ 0.23
CLN3-254ENST00000637050 DNPH1O43598 174 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 EIF1BO60739 113 aaKnown RBP16.5■□□□□ 0.23
CLN3-254ENST00000637050 RAB36O95755 333 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 GYPBP06028 91 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 POU3F2P20265 443 aaPredicted RBP16.5■□□□□ 0.23
CLN3-254ENST00000637050 DCKP27707 260 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 HSF1Q00613 529 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 DBPQ10586 325 aaPredicted RBP16.5■□□□□ 0.23
CLN3-254ENST00000637050 ESPNLQ6ZVH7 1005 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 FAM109AQ8N4B1 249 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 EXD3Q8N9H8 876 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 C9orf43Q8TAL5 461 aaPredicted RBP16.5■□□□□ 0.23
CLN3-254ENST00000637050 ADGRG7Q96K78 797 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 ACKR4Q9NPB9 350 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 HAO2Q9NYQ3 351 aa16.5■□□□□ 0.23
CLN3-254ENST00000637050 CELSR3Q9NYQ7 3312 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 ASPMQ8IZT6 3477 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 CNTRLQ7Z7A1 2325 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 XKRYO14609 159 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 SEC14L5O43304 696 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 FREM3P0C091 2139 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 ACVR1BP36896 505 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 STARP49675 285 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 DAP3P51398 398 aaKnown RBP16.49■□□□□ 0.23
CLN3-254ENST00000637050 AGFG1P52594 562 aaKnown RBP16.49■□□□□ 0.23
CLN3-254ENST00000637050 POU3F1Q03052 451 aaPredicted RBP16.49■□□□□ 0.23
CLN3-254ENST00000637050 RAB39AQ14964 217 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 UBE2UQ5VVX9 321 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 B3GLCTQ6Y288 498 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 ASB18Q6ZVZ8 466 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 SLC35D2Q76EJ3 337 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 GHDCQ8N2G8 530 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 TM9SF4Q92544 642 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 OXGR1Q96P68 337 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 ASB6Q9NWX5 421 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 TAS2R16Q9NYV7 291 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 NDUFA13Q9P0J0 144 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 NOX1Q9Y5S8 564 aa16.49■□□□□ 0.23
CLN3-254ENST00000637050 SPTBN2O15020 2390 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 SMIM31A0A1B0GVY4 71 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 ZNF99A8MXY4 864 aaPredicted RBP16.48■□□□□ 0.23
CLN3-254ENST00000637050 H0YC42 278 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 K7ENP7 123 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 ACOT7O00154 380 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 ARHGEF9O43307 516 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 APOL3O95236 402 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 RENP00797 406 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 IFNGR1P15260 489 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 SPI1P17947 270 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 KLK2P20151 261 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 GSTT1P30711 240 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 SUCLG1P53597 346 aaKnown RBP16.48■□□□□ 0.23
CLN3-254ENST00000637050 RAC3P60763 192 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 RPS7P62081 194 aaKnown RBP16.48■□□□□ 0.23
CLN3-254ENST00000637050 LGALS3BPQ08380 585 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 SLC10A1Q14973 349 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 RNFT1Q5M7Z0 435 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 SLC35D3Q5M8T2 416 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 FOXB2Q5VYV0 432 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 TMEM225Q6GV28 225 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 INO80CQ6PI98 192 aaPredicted RBP16.48■□□□□ 0.23
CLN3-254ENST00000637050 GPR141Q7Z602 305 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 ZADH2Q8N4Q0 377 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 ASB10Q8WXI3 467 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 FCGR1BQ92637 280 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 RORBQ92753 470 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 DCBLD2Q96PD2 775 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 FAM192AQ9GZU8 254 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 SLC6A15Q9H2J7 730 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 RPRD1BQ9NQG5 326 aaKnown RBP16.48■□□□□ 0.23
CLN3-254ENST00000637050 RASD1Q9Y272 281 aa16.48■□□□□ 0.23
CLN3-254ENST00000637050 PRSS37A4D1T9 235 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 A6NIZ1 184 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 NPIPA5E9PKD4 350 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 J3QRE1 110 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 EIF1AYO14602 144 aaKnown RBP16.47■□□□□ 0.23
CLN3-254ENST00000637050 RAMP1O60894 148 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 SEC14L2O76054 403 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 INMTO95050 263 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 BCL10O95999 233 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 TTKP33981 857 aa16.47■□□□□ 0.23
CLN3-254ENST00000637050 LHX2P50458 406 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms