RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PARPBPQ9NWS1 579 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 PROCRQ9UNN8 238 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 MAGED1Q9Y5V3 778 aaPredicted RBP14.19□□□□□ -0.14
CLN6-216ENST00000636876 FREM1Q5H8C1 2179 aa14.19□□□□□ -0.14
CLN6-216ENST00000636876 CACNA1CQ13936 2221 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 EEF1E1-BLOC1S5C9J1V9 151 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 EEF1E1O43324 174 aaKnown RBP14.18□□□□□ -0.14
CLN6-216ENST00000636876 AKAP8O43823 692 aaKnown RBP14.18□□□□□ -0.14
CLN6-216ENST00000636876 MRPL33O75394 65 aaKnown RBP14.18□□□□□ -0.14
CLN6-216ENST00000636876 SERPINI2O75830 405 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 SMNDC1O75940 238 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLN6-216ENST00000636876 NDUFB2O95178 105 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 F13BP05160 661 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 RNF224P0DH78 156 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 ANXA8P13928 327 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 OR3A2P47893 321 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 CLDN17P56750 224 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 FXYD6P3P58550 94 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 CDSNQ15517 529 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 SMARCD3Q6STE5 483 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 CD300LDQ6UXZ3 194 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 TFAP2EQ6VUC0 442 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 ZNF620Q6ZNG0 422 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 RASSF6Q6ZTQ3 369 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 SLC35D2Q76EJ3 337 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 AAED1Q7RTV5 226 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 LRRC75AQ8NAA5 344 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 ICA1LQ8NDH6 482 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 FANK1Q8TC84 345 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 SSC4DQ8WTU2 575 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 CA5BP1Q8WTZ4 195 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 TXNDC15Q96J42 360 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 NIPSNAP1Q9BPW8 284 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 NDEL1Q9GZM8 345 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 OPN3Q9H1Y3 402 aaPredicted RBP14.18□□□□□ -0.14
CLN6-216ENST00000636876 JKAMPQ9P055 326 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 RCE1Q9Y256 329 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 ADGRG4Q8IZF6 3080 aa14.18□□□□□ -0.14
CLN6-216ENST00000636876 A0A1W2PRG6 482 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 NPIPB13A6NJU9 1138 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 SAC3D1A6NKF1 404 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 FAM90A27PA6NNH2 459 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 NPIPB4C9JG80 1138 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 G3V2T6 193 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 MSTNO14793 375 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ZNF432O94892 652 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 BAG2O95816 211 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 IFNGR1P15260 489 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 GSTM3P21266 225 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 EDNRAP25101 427 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 CTXN1P60606 82 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 COX10Q12887 443 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 TAF11Q15544 211 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 FAHD1Q6P587 224 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 THSD4Q6ZMP0 1018 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.17□□□□□ -0.14
CLN6-216ENST00000636876 STK32CQ86UX6 486 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 IGFN1Q86VF2 1251 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ZDHHC13Q8IUH4 622 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ZNF100Q8IYN0 542 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ZNF610Q8N9Z0 462 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ATG16L2Q8NAA4 619 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 APH1AQ96BI3 265 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 UCK2Q9BZX2 261 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ENKD1Q9H0I2 346 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 GABARAPL1Q9H0R8 117 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 ZNF556Q9HAH1 456 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 MED29Q9NX70 200 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 OAZ3Q9UMX2 235 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 CDH10Q9Y6N8 788 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 NBPF19A0A087WUL8 3843 aa14.17□□□□□ -0.14
CLN6-216ENST00000636876 MCIDASD6RGH6 385 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 CLDN14O95500 239 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 IGHMP01871 453 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 RPL4P36578 427 aaKnown RBP14.16□□□□□ -0.14
CLN6-216ENST00000636876 SELENOPP49908 381 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 ASCL1P50553 236 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 DAP3P51398 398 aaKnown RBP14.16□□□□□ -0.14
CLN6-216ENST00000636876 BIDP55957 195 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 MELKQ14680 651 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 RCN1Q15293 331 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 ACKR1Q16570 336 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 ANKRD34AQ69YU3 496 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 NIPAL3Q6P499 406 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 KIF18BQ86Y91 864 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 CLDN22Q8N7P3 220 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 SAMD8Q96LT4 415 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 OR2M2Q96R28 347 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 GPX7Q96SL4 187 aaPredicted RBP14.16□□□□□ -0.14
CLN6-216ENST00000636876 EMC6Q9BV81 110 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 KATNB1Q9BVA0 655 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 OR52D1Q9H346 318 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 TXNIPQ9H3M7 391 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 KCNJ16Q9NPI9 418 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 KIF17Q9P2E2 1029 aa14.16□□□□□ -0.14
CLN6-216ENST00000636876 UTP20O75691 2785 aaKnown RBP14.16□□□□□ -0.14
CLN6-216ENST00000636876 SLC35F4A4IF30 521 aa14.15□□□□□ -0.14
CLN6-216ENST00000636876 NKX2-6A6NCS4 301 aa14.15□□□□□ -0.14
CLN6-216ENST00000636876 A8MXE2 369 aa14.15□□□□□ -0.14
CLN6-216ENST00000636876 SLC43A1O75387 559 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms