RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 SLC7A10Q9NS82 523 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 MRPL39Q9NYK5 338 aaKnown RBP7.54□□□□□ -1.2
CDKL5-209ENST00000635828 SLC5A6Q9Y289 635 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 CADP27708 2225 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 FAM171A2A8MVW0 826 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 G3V2T6 193 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 DCTN6O00399 190 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 YES1P07947 543 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 TSPAN19P0C672 248 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 CLUP10909 449 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 ANPEPP15144 967 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 POU1F1P28069 291 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 TIMP3P35625 211 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 ACKR1Q16570 336 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 ALG10Q5BKT4 473 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 B3GLCTQ6Y288 498 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 PTCHD4Q6ZW05 846 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 MAMDC2Q7Z304 686 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-209ENST00000635828 GIPC3Q8TF64 312 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 KLHL4Q9C0H6 718 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF229Q9UJW7 825 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 HNRNPRO43390 633 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 OR2T1O43869 369 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 LYZL6O75951 148 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CTXN1P60606 82 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 TFF3Q07654 80 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CASP12Q6UXS9 341 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 PQLC1Q8N2U9 271 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CBR4Q8N4T8 237 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 FAM26EQ8N5C1 309 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 PIGXQ8TBF5 258 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 MAGEE2Q8TD90 523 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 NPDC1Q9NQX5 325 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 TMCC3Q9ULS5 477 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 HIF3AQ9Y2N7 669 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 NOSIPQ9Y314 301 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ABCA4P78363 2273 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF503-AS2A6NEH8 195 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 UNC119BA6NIH7 251 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 M0R3G1 203 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 SS18L1O75177 396 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF432O94892 652 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CLIC3O95833 236 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF43P17038 809 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CCKARP32238 428 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ZBED5Q49AG3 693 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 MESTQ5EB52 335 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 FBXW10Q5XX13 1052 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ACSM5Q6NUN0 579 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 SHQ1Q6PI26 577 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 GALNT4Q8N4A0 578 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ATG16L2Q8NAA4 619 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CYB561A3Q8NBI2 242 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 HS6ST2Q96MM7 605 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 HCAR1Q9BXC0 346 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ASPNQ9BXN1 380 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 SLC19A3Q9BZV2 496 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 BCO1Q9HAY6 547 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 TIGARQ9NQ88 270 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 GPR52Q9Y2T5 361 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 IER3IP1Q9Y5U9 82 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 SH3D21A4FU49 640 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 FAM183AA6NL82 134 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 DLGAP1O14490 977 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CDAP32320 146 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CLK1P49759 484 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CASP6P55212 293 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 FAPQ12884 760 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF362Q5T0B9 420 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 TFAP2EQ6VUC0 442 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF620Q6ZNG0 422 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 SLC35D2Q76EJ3 337 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 FAM122BQ7Z309 247 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 OR51L1Q8NGJ5 315 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 FANK1Q8TC84 345 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 CA5BP1Q8WTZ4 195 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 SMAP2Q8WU79 429 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 HDAC2Q92769 488 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 POLR2J2Q9GZM3 115 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 POLR2J3Q9H1A7 115 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 MED20Q9H944 212 aa7.53□□□□□ -1.2
CDKL5-209ENST00000635828 RRP15Q9Y3B9 282 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
CDKL5-209ENST00000635828 TEX13CA0A0J9YWL9 993 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 DEAF1O75398 565 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-209ENST00000635828 GYPBP06028 91 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 RPL4P36578 427 aaKnown RBP7.52□□□□□ -1.21
CDKL5-209ENST00000635828 CDKN2AP42771 156 aaKnown RBP7.52□□□□□ -1.21
CDKL5-209ENST00000635828 TUBA1BP68363 451 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 TUBA4AP68366 448 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 TUBA1AQ71U36 451 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 MCEMP1Q8IX19 187 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 RNF113BQ8IZP6 322 aaKnown RBP7.52□□□□□ -1.21
CDKL5-209ENST00000635828 UBE2J2Q8N2K1 259 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 CENPNQ96H22 339 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-209ENST00000635828 GMPPAQ96IJ6 420 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-209ENST00000635828 OR2M2Q96R28 347 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 ANKRD19PQ9H560 264 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 KLHL9Q9P2J3 617 aa7.52□□□□□ -1.21
CDKL5-209ENST00000635828 B3GALT5Q9Y2C3 310 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms