RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DEFB108AA8MXU0 73 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 MGRN1O60291 552 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 TMCC2O75069 709 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 RAD51DO75771 328 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 PRSS23O95084 383 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 BCL10O95999 233 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 ITGA5P08648 1049 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 SAGP10523 405 aaPredicted RBP12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 IFI30P13284 250 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 CBLP22681 906 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 NTF4P34130 210 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 SELENOPP49908 381 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 PRPS1P60891 318 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 PRKCDQ05655 676 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 TRAP1Q12931 704 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 GK3PQ14409 553 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 TAB1Q15750 504 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 GABRA6Q16445 453 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 FAM205BPQ63HN1 556 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 ANKRD16Q6P6B7 361 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 SLC46A3Q7Z3Q1 461 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 KDM8Q8N371 416 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 LINC00471Q8N535 108 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 PIK3IP1Q96FE7 263 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 C7orf34Q96L11 122 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 OR2M2Q96R28 347 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 MGAT4BQ9UQ53 548 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 HIF3AQ9Y2N7 669 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 CREBBPQ92793 2442 aa12.33□□□□□ -0.44
SNRPA1-216ENST00000626000 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 EFCAB9A8MZ26 197 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 MCIDASD6RGH6 385 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 BLOC1S5-TXNDC5H3BN57 136 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 FFAR1O14842 300 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 KRT36O76013 467 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 UBOX5O94941 541 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 THBDP07204 575 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 CD3EP07766 207 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 PTAFRP25105 342 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 UBE2NP61088 152 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 ROR2Q01974 943 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 FAM98BQ52LJ0 330 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 FGD3Q5JSP0 725 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 TMEM108Q6UXF1 575 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 C20orf204Q6ZNR8 217 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 TMPRSS11FQ6ZWK6 438 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 SLC35D2Q76EJ3 337 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 PIWIL3Q7Z3Z3 882 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 NRMQ8IXM6 262 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 C20orf196Q8IYI0 205 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 OR6N1Q8NGY5 312 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 ZNF566Q969W8 418 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 SLC25A44Q96H78 314 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 DHRS1Q96LJ7 313 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 ALKBH3Q96Q83 286 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 BTBD10Q9BSF8 475 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 INIPQ9NRY2 104 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 MAN2C1Q9NTJ4 1040 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 TAS2R5Q9NYW4 299 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 SEC14L4Q9UDX3 406 aa12.32□□□□□ -0.44
SNRPA1-216ENST00000626000 ABCA4P78363 2273 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 A0A087WUU8 490 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 SLC35F4A4IF30 521 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 LRRN3E7EW58 273 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 KLF4O43474 513 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 GADD45GO95257 159 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 HPRP00739 348 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 IGHG1P01857 330 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 SEMG1P04279 462 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 IFNGR1P15260 489 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 PTNP21246 168 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 DNASE1P24855 282 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 EDNRAP25101 427 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 YAP1P46937 504 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 CSNK1A1P48729 337 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 RPS4XP62701 263 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 VLDLRP98155 873 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 CHRNB3Q05901 458 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 RPL18Q07020 188 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 C3orf36Q3SXR2 165 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 ALG10Q5BKT4 473 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 DPPA2Q7Z7J5 298 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 OAFQ86UD1 273 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 ZDHHC21Q8IVQ6 265 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 DEPDC4Q8N2C3 294 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 NANOS1Q8WY41 292 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 PLPPR2Q96GM1 343 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 THTPAQ9BU02 230 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 ULBP2Q9BZM5 246 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 MMADHCQ9H3L0 296 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 SLC17A5Q9NRA2 495 aa12.31□□□□□ -0.44
SNRPA1-216ENST00000626000 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms