RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 DHRS9Q9BPW9 319 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 ELAC2Q9BQ52 826 aaKnown RBP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 PRSS27Q9BQR3 290 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 ALG2Q9H553 416 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 DENND2DQ9H6A0 471 aaPredicted RBP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 B3GAT2Q9NPZ5 323 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 CISD1Q9NZ45 108 aaKnown RBP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 SEC14L4Q9UDX3 406 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
LINC00963-217ENST00000624009 NPIPB13A6NJU9 1138 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 FAM171A2A8MVW0 826 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 NPIPB4C9JG80 1138 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 ENTPD5O75356 428 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 UPK3AO75631 287 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 HPRP00739 348 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 TSPAN19P0C672 248 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 DRD4P21917 467 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 CDH11P55287 796 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 TAS2R41P59536 307 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 ROR2Q01974 943 aaKnown RBP10.88□□□□□ -0.67
LINC00963-217ENST00000624009 POU3F1Q03052 451 aaPredicted RBP10.88□□□□□ -0.67
LINC00963-217ENST00000624009 LIPEQ05469 1076 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 ST3GAL3Q11203 375 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 SF3A3Q12874 501 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00963-217ENST00000624009 AGAP6Q5VW22 663 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 ALKBH2Q6NS38 261 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 LINGO2Q7L985 606 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 HDDC2Q7Z4H3 204 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 CPLX4Q7Z7G2 160 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 BIVMQ86UB2 503 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 TSPYL5Q86VY4 417 aaPredicted RBP10.88□□□□□ -0.67
LINC00963-217ENST00000624009 KDM8Q8N371 416 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 OR6X1Q8NH79 312 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 TRMT61AQ96FX7 289 aaKnown RBP10.88□□□□□ -0.67
LINC00963-217ENST00000624009 PRRC1Q96M27 445 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 CRLF2Q9HC73 371 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 GPR35Q9HC97 309 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 SPAG4Q9NPE6 437 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 LAMP3Q9UQV4 416 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 ABCA2Q9BZC7 2435 aa10.88□□□□□ -0.67
LINC00963-217ENST00000624009 NME4O00746 187 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 MGRN1O60291 552 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 OR6A2O95222 327 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 CH25HO95992 272 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 IGKV3-15P01624 115 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 IGLV1-44P01699 117 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 HIST1H2ABP04908 130 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 SOD3P08294 240 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 ADORA3P0DMS8 318 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 NUDT2P50583 147 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 ZNF83P51522 516 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 SLC7A2P52569 658 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 SEC24CP53992 1094 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 UBE2NP61088 152 aaKnown RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 SLC25A3Q00325 362 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 ANKDD1AQ495B1 522 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 SPATS1Q496A3 300 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 LRRC23Q53EV4 343 aaPredicted RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 C9orf135Q5VTT2 229 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 SLC22A25Q6T423 547 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 DEF8Q6ZN54 512 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 CBLL1Q75N03 491 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 HIST3H2AQ7L7L0 130 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 OFCC1Q8IZS5 231 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 C10orf53Q8N6V4 93 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 ANKS4BQ8N8V4 417 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 IL17RDQ8NFM7 739 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 GEMIN6Q8WXD5 167 aaKnown RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 HIST1H2ACQ93077 130 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 C18orf12Q96KH6 178 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 SLC38A2Q96QD8 506 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 BDH2Q9BUT1 245 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 TRAF4Q9BUZ4 470 aaPredicted RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 KATNB1Q9BVA0 655 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 NELFAQ9H3P2 528 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 BARX1Q9HBU1 254 aaPredicted RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 MEPEQ9NQ76 525 aaPredicted RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 TAS2R5Q9NYW4 299 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 STX18Q9P2W9 335 aaKnown RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 FBXO9Q9UK97 447 aaPredicted RBP10.87□□□□□ -0.67
LINC00963-217ENST00000624009 USP22Q9UPT9 525 aa10.87□□□□□ -0.67
LINC00963-217ENST00000624009 YLPM1P49750 1951 aaKnown RBP10.86□□□□□ -0.67
LINC00963-217ENST00000624009 SLC35F4A4IF30 521 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 ZNF726A6NNF4 738 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 M0R1B8 84 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 CXCR6O00574 342 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 PDE5AO76074 875 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 IFNW1P05000 195 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 BMP4P12644 408 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 HLA-DOBP13765 273 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 AHCYP23526 432 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 TTKP33981 857 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 ARR3P36575 388 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 GSK3BP49841 420 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 ATP5J2P56134 94 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 IL1RL1Q01638 556 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 PIN1Q13526 163 aaPredicted RBP10.86□□□□□ -0.67
LINC00963-217ENST00000624009 TAF11Q15544 211 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms