RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ZNF813Q6ZN06 617 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 PIK3C3Q8NEB9 887 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 ANKK1Q8NFD2 765 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 MAL2Q969L2 176 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 ZNF75AQ96N20 296 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 LRRC37BQ96QE4 947 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 ZBTB18Q99592 522 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 PARD6BQ9BYG5 372 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 TPT1P8Q9HAU6 139 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 ZNF275Q9NSD4 429 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-214ENST00000622680 MED29Q9NX70 200 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 B3GNT2Q9NY97 397 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 REV1Q9UBZ9 1251 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 SPEF1Q9Y4P9 236 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 NOTCH1P46531 2555 aa9.41□□□□□ -0.9
LINC00963-214ENST00000622680 VWFP04275 2813 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 WNK1Q9H4A3 2382 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 A0A1B0GWA3 101 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 AKAP8O43823 692 aaKnown RBP9.4□□□□□ -0.9
LINC00963-214ENST00000622680 SERPINI2O75830 405 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 MSMBP08118 114 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 GAAP10253 952 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 KITP10721 976 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 NAT2P11245 290 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 ZNF35P13682 527 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 NQO1P15559 274 aaKnown RBP9.4□□□□□ -0.9
LINC00963-214ENST00000622680 ZNF14P17017 642 aaPredicted RBP9.4□□□□□ -0.9
LINC00963-214ENST00000622680 PCMT1P22061 227 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 ACHEP22303 614 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 GIPRP48546 466 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 PTDSS1P48651 473 aaKnown RBP9.4□□□□□ -0.9
LINC00963-214ENST00000622680 POU3F1Q03052 451 aaPredicted RBP9.4□□□□□ -0.9
LINC00963-214ENST00000622680 LRRC74AQ0VAA2 488 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 MFSD13AQ14CX5 517 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 C6orf10Q5SRN2 563 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 FAM69AQ5T7M9 428 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 C6orf89Q6UWU4 347 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
LINC00963-214ENST00000622680 UEVLDQ8IX04 471 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 OR9I1Q8NGQ6 314 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 SLC38A4Q969I6 547 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 RACGAP1Q9H0H5 632 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 CACYBPQ9HB71 228 aaKnown RBP9.4□□□□□ -0.9
LINC00963-214ENST00000622680 KLHL14Q9P2G3 628 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 RPS6KB2Q9UBS0 482 aa9.4□□□□□ -0.9
LINC00963-214ENST00000622680 TRAV36DV7A0A075B6V5 113 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 LOC105371242A0A075B767 164 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 A0A0G2JPF8 293 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 A0A1W2PPW3 197 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 TMEM247A6NEH6 219 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 HNRNPCL2B2RXH8 293 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 HNRNPCL3B7ZW38 293 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 LRRN3E7EW58 273 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 MS4A18H0YCH9 400 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 TM9SF1O15321 606 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 RGS16O15492 202 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 KCNAB3O43448 404 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 HNRNPCL1O60812 293 aaKnown RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 RP2O75695 350 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 AVPP01185 164 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 TFP02787 698 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 PATE4P0C8F1 98 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 HNRNPCL4P0DMR1 293 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 EGR1P18146 543 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 CAMK2DQ13557 499 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 RAB39AQ14964 217 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 TRMT5Q32P41 509 aaKnown RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 MS4A18Q3C1V0 323 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 GLIPR1L2Q4G1C9 344 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 SLC9B1Q4ZJI4 515 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 ALG10BQ5I7T1 473 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 AVPI1Q5T686 147 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 GKAP1Q5VSY0 366 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 NXNQ6DKJ4 435 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 UGT2A3Q6UWM9 527 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 H1FNTQ75WM6 255 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 C20orf196Q8IYI0 205 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 C3orf56Q8N813 242 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 IL17RDQ8NFM7 739 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 OR51F2Q8NH61 342 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 ZNF418Q8TF45 676 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 RDH5Q92781 318 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 TXNDC15Q96J42 360 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 MOGAT1Q96PD6 335 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 PAIP2Q9BPZ3 127 aaKnown RBP9.39□□□□□ -0.91
LINC00963-214ENST00000622680 OR51B6Q9H340 312 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 CENPHQ9H3R5 247 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 ARMC7Q9H6L4 198 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 IFT52Q9Y366 437 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 GRIP1Q9Y3R0 1128 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 NOX1Q9Y5S8 564 aa9.39□□□□□ -0.91
LINC00963-214ENST00000622680 PRKDCP78527 4128 aaKnown RBP9.38□□□□□ -0.91
LINC00963-214ENST00000622680 A0A087WUJ7 227 aa9.38□□□□□ -0.91
LINC00963-214ENST00000622680 A0A0A6YYJ9 748 aa9.38□□□□□ -0.91
LINC00963-214ENST00000622680 SLCO1B7G3V0H7 640 aa9.38□□□□□ -0.91
LINC00963-214ENST00000622680 OR2T1O43869 369 aa9.38□□□□□ -0.91
LINC00963-214ENST00000622680 CDC14BO60729 498 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms