RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 NUDT9Q9BW91 350 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 PHF7Q9BWX1 381 aaPredicted RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 MRPL39Q9NYK5 338 aaKnown RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 FRRS1LQ9P0K9 344 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 ZNF346Q9UL40 294 aaKnown RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 CPAMD8Q8IZJ3 1885 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 IGHV1OR21-1A0A087WYE8 117 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 TMEM72A0PK05 275 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 TRABD2BA6NFA1 517 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ACOD1A6NK06 481 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 RHPN2P1A8MT19 583 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 FAM171A2A8MVW0 826 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 TPPPO94811 219 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 CALCBP10092 127 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 MAPK3P27361 379 aaPredicted RBP8.55□□□□□ -1.04
PDPN-212ENST00000621990 GRPRP30550 384 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 MNDAP41218 407 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 CFHR1Q03591 330 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ALKBH1Q13686 389 aaKnown RBP8.55□□□□□ -1.04
PDPN-212ENST00000621990 Q499Y3 187 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 LIPNQ5VXI9 398 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ESPNLQ6ZVH7 1005 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 FAM220AQ7Z4H9 259 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 EID2Q8N6I1 236 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 OR1L3Q8NH93 324 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ZNF671Q8TAW3 534 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ZFP3Q96NJ6 502 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 UCKL1Q9NWZ5 548 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 TAS2R5Q9NYW4 299 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 V9GY05 133 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 VCANP13611 3396 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 TRAV36DV7A0A075B6V5 113 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 TRBV5-7A0A0A0MS05 114 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 OR6C76A6NM76 312 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 NUDT21O43809 227 aaKnown RBP8.55□□□□□ -1.04
PDPN-212ENST00000621990 NPIPB7O75200 414 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ZNF780AO75290 641 aaPredicted RBP8.55□□□□□ -1.04
PDPN-212ENST00000621990 ITGA10O75578 1167 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 MT-ATP6P00846 226 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ADRB1P08588 477 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ANKRD34CP0C6C1 535 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 OR8G3PP0DMU2 310 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ALOX5APP20292 161 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 DMWDQ09019 674 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 CD276Q5ZPR3 534 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 BTN2A1Q7KYR7 527 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 LRRTM1Q86UE6 522 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 TDHQ8IZJ6 230 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 OR5AK2Q8NH90 309 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 ZNF563Q8TA94 476 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 CLIP3Q96DZ5 547 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 SLC41A2Q96JW4 573 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 PTDSS2Q9BVG9 487 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 WWTR1Q9GZV5 400 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 WDR76Q9H967 626 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 EMC7Q9NPA0 242 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 CLEC4AQ9UMR7 237 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 CEP192Q8TEP8 1941 aa8.55□□□□□ -1.04
PDPN-212ENST00000621990 A0A087WV48 116 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 A6NL46 340 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 OR4C45A6NMZ5 311 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PSMD9O00233 223 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PHYHO14832 338 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 HCRTR2O43614 444 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 SULT1B1O43704 296 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ZNF254O75437 659 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 SERPINI2O75830 405 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PIAS2O75928 621 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ZNF432O94892 652 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 RAF1P04049 648 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 GIFP27352 417 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 IL12BP29460 328 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 SCAND1P57086 179 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 FCN2Q15485 313 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 GSG1Q2KHT4 349 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 SNAP47Q5SQN1 464 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PWWP2BQ6NUJ5 590 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 FDX2Q6P4F2 183 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 STAC2Q6ZMT1 411 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 DNM1P46Q6ZS02 220 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 OR11H7Q8NGC8 314 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 OR1N1Q8NGS0 311 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 DAZLQ92904 295 aaKnown RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 CCDC74AQ96AQ1 378 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 HYLS1Q96M11 299 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 KLHL15Q96M94 604 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 CACNG6Q9BXT2 260 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ACTR6Q9GZN1 396 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 SLC25A18Q9H1K4 315 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 TSPAN10Q9H1Z9 355 aaPredicted RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 LIN7BQ9HAP6 207 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 SLCO1C1Q9NYB5 712 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 DHCR7Q9UBM7 475 aaKnown RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 ETV7Q9Y603 341 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 TMEM14AQ9Y6G1 99 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 FER1L5A0AVI2 2057 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 GON4LQ3T8J9 2241 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 TRAV6A0A075B6T7 132 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 A8MUA0 341 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 GABARAPH6UMI1 98 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms