RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SLC25A30Q5SVS4 291 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 SLC35F1Q5T1Q4 408 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 GTF2IRD2BQ6EKJ0 949 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 PTCHD4Q6ZW05 846 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 FCRLAQ7L513 359 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 FAM122BQ7Z309 247 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ADGRE4PQ86SQ3 457 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 GTF2IRD2Q86UP8 949 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 IGFN1Q86VF2 1251 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 UEVLDQ8IX04 471 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 C8orf59Q8N0T1 100 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 MARVELD2Q8N4S9 558 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 FAM26EQ8N5C1 309 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ARIH2OSQ8N7S6 290 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 TCEANCQ8N8B7 351 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 OR8J1Q8NGP2 316 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 FAM81AQ8TBF8 368 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 FBLIM1Q8WUP2 373 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 CNBD2Q96M20 576 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 Q96M85 177 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 DDOQ99489 341 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 TUBA1CQ9BQE3 449 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 POLDIP3Q9BY77 421 aaKnown RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 PRRG3Q9BZD7 231 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 TXNIPQ9H3M7 391 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 CMC2Q9NRP2 79 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ASF1BQ9NVP2 202 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 IMPAD1Q9NX62 359 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 UBAP1Q9NZ09 502 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 GRHPRQ9UBQ7 328 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 MCTS1Q9ULC4 181 aaKnown RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 RNF6Q9Y252 685 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ADAM18Q9Y3Q7 739 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF175Q9Y473 711 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ACACBO00763 2458 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 A6NIZ1 184 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 CLCA1A8K7I4 914 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 ZNHIT1O43257 154 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 PRKYO43930 277 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 SLC2A10O95528 541 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 IFNGP01579 166 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 IGHMP01871 453 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 HOXD4P09016 255 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-209ENST00000620393 IFNGR1P15260 489 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 HIST1H1CP16403 213 aaKnown RBP7.15□□□□□ -1.26
CPNE3-209ENST00000620393 GABRB1P18505 474 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 SDHAP31040 664 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 CDKN2AP42771 156 aaKnown RBP7.15□□□□□ -1.26
CPNE3-209ENST00000620393 DAP3P51398 398 aaKnown RBP7.15□□□□□ -1.26
CPNE3-209ENST00000620393 SLC16A1P53985 500 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 RAP1BP61224 184 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 RAP1AP62834 184 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 POU3F1Q03052 451 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-209ENST00000620393 CD47Q08722 323 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 RASGEF1BQ0VAM2 473 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 CDK5R2Q13319 367 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 ITGADQ13349 1161 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 MAD2L1BPQ15013 274 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-209ENST00000620393 PON3Q15166 354 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 OCLNQ16625 522 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 ARMC4Q5T2S8 1044 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 CREB3L2Q70SY1 520 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 SLC35D2Q76EJ3 337 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 GPAT4Q86UL3 456 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 ENTHD1Q8IYW4 607 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 ZIC4Q8N9L1 334 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 NPEPL1Q8NDH3 523 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 OR9K2Q8NGE7 335 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 OR52E2Q8NGJ4 325 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 OR5M9Q8NGP3 310 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 OR4K13Q8NH42 304 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 TMEM163Q8TC26 289 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 PTP4A1Q93096 173 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 TXNDC15Q96J42 360 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 PLEKHA8Q96JA3 519 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 TSPAN32Q96QS1 320 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 IL4I1Q96RQ9 567 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 SLX1AQ9BQ83 275 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 PRRG4Q9BZD6 226 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 FN3KQ9H479 309 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 RNF122Q9H9V4 155 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 CALHM2Q9HA72 323 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 RASSF1Q9NS23 344 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 KLHL13Q9P2N7 655 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 AASSQ9UDR5 926 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 KLHL21Q9UJP4 597 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 ING1Q9UK53 422 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-209ENST00000620393 LRCH1Q9Y2L9 728 aa7.15□□□□□ -1.26
CPNE3-209ENST00000620393 TNRC6AQ8NDV7 1962 aaKnown RBP7.15□□□□□ -1.27
CPNE3-209ENST00000620393 IGKV3D-15A0A087WSY6 115 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 TEX13CA0A0J9YWL9 993 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 CD8B2A6NJW9 211 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 SLC22A20A6NK97 555 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF726A6NNF4 738 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 RIIAD1A6NNX1 92 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF716A6NP11 495 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF724A8MTY0 619 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 XKRYO14609 159 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ARHGEF9O43307 516 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms