RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CLDN1O95832 211 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ADAP00813 363 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CSTAP01040 98 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 OPN1SWP03999 348 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 OPN1LWP04000 364 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 DBIP07108 87 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 HTR1AP08908 422 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 HNRNPCL4P0DMR1 293 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 UBL4AP11441 157 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 NID1P14543 1247 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 HK1P19367 917 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 KLK2P20151 261 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 PRKACGP22612 351 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 S100A1P23297 94 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 PSMA1P25786 263 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 PTBP1P26599 531 aaKnown RBP eCLIP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 HTR2AP28223 471 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 IFNGR2P38484 337 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ACAA2P42765 397 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 YAP1P46937 504 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CAPZA2P47755 286 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 LHX2P50458 406 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF136P52737 540 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CRISP3P54108 245 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 GP2P55259 537 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 DLX5P56178 289 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CLDN18P56856 261 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CLDN20P56880 219 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ADORA2A-AS1P86434 159 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 FOXF1Q12946 379 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CBX3Q13185 183 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 QPRTQ15274 297 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 DUSP7Q16829 419 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 IQCCQ4KMZ1 466 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 SLC25A53Q5H9E4 307 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 SPANXN2Q5MJ10 180 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 PDSS1Q5T2R2 415 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 LAIR2Q6ISS4 152 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 REEP3Q6NUK4 255 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CD300LDQ6UXZ3 194 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 GGNQ86UU5 652 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 RBM45Q8IUH3 476 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 GTPBP8Q8N3Z3 284 aaPredicted RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 STX19Q8N4C7 294 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 MEIOBQ8N635 442 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 OR10Q1Q8NGQ4 319 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 OR5W2Q8NH69 310 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 OR14L1PQ8NHC6 308 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 MBD3L2Q8NHZ7 208 aaPredicted RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 MCFD2Q8NI22 146 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 BBS10Q8TAM1 723 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 HSH2DQ96JZ2 352 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ADGRG7Q96K78 797 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF607Q96SK3 696 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 NEURL2Q9BR09 285 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 DGCR6LQ9BY27 220 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 PRRG3Q9BZD7 231 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 SLIRPQ9GZT3 109 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 OR10A4Q9H209 315 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 RIBC2Q9H4K1 309 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ARMC7Q9H6L4 198 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 RHBDL2Q9NX52 303 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 IMPAD1Q9NX62 359 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CALML5Q9NZT1 146 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 SELENONQ9NZV5 590 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 SH3BGRL2Q9UJC5 107 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 DKKL1Q9UK85 242 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 TMCC3Q9ULS5 477 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 STUB1Q9UNE7 303 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 RNF6Q9Y252 685 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 VDAC3Q9Y277 283 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 TRAPPC4Q9Y296 219 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF337Q9Y3M9 751 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 GRIP1Q9Y3R0 1128 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 RPL36Q9Y3U8 105 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 FAM215AQ9Y5M1 114 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF469Q96JG9 3925 aaPredicted RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 A0A0J9YW62 118 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 SLC35F4A4IF30 521 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CENPBD1B2RD01 187 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 C5orf58C9J3I9 102 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CCRL2O00421 344 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 FAAHO00519 579 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF264O43296 627 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 DNPH1O43598 174 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TMCC2O75069 709 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM127O75204 238 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CYP7B1O75881 506 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TOXO94900 526 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 CCNB2O95067 398 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 GADD45GO95257 159 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 LGI1O95970 557 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 THY1P04216 161 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 IFNW1P05000 195 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 THBS1P07996 1170 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TRAPPC2P0DI81 140 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 TRAPPC2BP0DI82 140 aa4.7□□□□□ -1.66
SHMT1-211ENST00000618902 GLI4P10075 376 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms