RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PLPP3O14495 311 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 ABCD4O14678 606 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 OR6A2O95222 327 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 SERPINA1P01009 418 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 IFNW1P05000 195 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 ADORA3P0DMS8 318 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 NCK1P16333 377 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 UGT2B15P54855 530 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 ROR2Q01974 943 aaKnown RBP14.01□□□□□ -0.17
BRCA1-228ENST00000618469 KLHL17Q6TDP4 642 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 NANOGNBQ7Z5D8 188 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 GPR137CQ8N3F9 429 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 WDR31Q8NA23 367 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 OR1K1Q8NGR3 316 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 PFN4Q8NHR9 129 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 GEMIN6Q8WXD5 167 aaKnown RBP14.01□□□□□ -0.17
BRCA1-228ENST00000618469 NEUROG1Q92886 237 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 PIGTQ969N2 578 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 FBXW5Q969U6 566 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 HSH2DQ96JZ2 352 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 PRRC1Q96M27 445 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 EMC6Q9BV81 110 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 MEPEQ9NQ76 525 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-228ENST00000618469 RIMS3Q9UJD0 308 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 ZNF229Q9UJW7 825 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 NOX1Q9Y5S8 564 aa14.01□□□□□ -0.17
BRCA1-228ENST00000618469 DSCAMO60469 2012 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 SMPD2O60906 423 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 RBM34P42696 430 aaKnown RBP14□□□□□ -0.17
BRCA1-228ENST00000618469 YAP1P46937 504 aaKnown RBP14□□□□□ -0.17
BRCA1-228ENST00000618469 CDH11P55287 796 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 SPOCK1Q08629 439 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 TBRG1Q3YBR2 411 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 IFI44LQ53G44 452 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 TMEM108Q6UXF1 575 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 CBLL1Q75N03 491 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 SLC46A3Q7Z3Q1 461 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 TMEM123Q8N131 208 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 LRRC17Q8N6Y2 441 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 RNF148Q8N7C7 305 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 ZNF611Q8N823 705 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 PIK3C3Q8NEB9 887 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 TMEM239Q8WW34 195 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 C1QTNF6Q9BXI9 259 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 ARL8BQ9NVJ2 186 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 EGFL7Q9UHF1 273 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 TAGLN3Q9UI15 199 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 MAGED1Q9Y5V3 778 aaPredicted RBP14□□□□□ -0.17
BRCA1-228ENST00000618469 TLN2Q9Y4G6 2542 aa14□□□□□ -0.17
BRCA1-228ENST00000618469 ARID1AO14497 2285 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 M0R3G1 203 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 RNF13O43567 381 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 PIP5K1CO60331 668 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 MT-ND1P03886 318 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 HIST1H2ABP04908 130 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 THRBP10828 461 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 PTAFRP25105 342 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 IFNA8P32881 189 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 SH3BGRP55822 239 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-228ENST00000618469 PRPS1P60891 318 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 CEACAM16Q2WEN9 425 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 ZNF672Q499Z4 452 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-228ENST00000618469 Q5PR19 223 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 FKBP9P1Q75LS8 142 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 HIST3H2AQ7L7L0 130 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 PXKQ7Z7A4 578 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 OFCC1Q8IZS5 231 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 RBM15BQ8NDT2 890 aaKnown RBP13.99□□□□□ -0.17
BRCA1-228ENST00000618469 ANKK1Q8NFD2 765 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 LILRB1Q8NHL6 650 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-228ENST00000618469 SPATA3Q8NHX4 192 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 TMEM171Q8WVE6 324 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 HIST1H2ACQ93077 130 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 PERPQ96FX8 193 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 TXNDC15Q96J42 360 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 CCT8L2Q96SF2 557 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 PIP5K1AQ99755 562 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 GPR35Q9HC97 309 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 C20orf141Q9NUB4 165 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 RHCGQ9UBD6 479 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 A4GNTQ9UNA3 340 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 SNX13Q9Y5W8 968 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 ROS1P08922 2347 aa13.99□□□□□ -0.17
BRCA1-228ENST00000618469 A0A096LPE4 126 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 A0A1W2PPZ6 126 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 SLC35F4A4IF30 521 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 SHISA9B4DS77 424 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 J3KTA2 159 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 SEC14L2O76054 403 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 WNT11O96014 354 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 ASAH2BP0C7U1 165 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 IFNGR1P15260 489 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 CD40P25942 277 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 UBE2NP61088 152 aaKnown RBP13.98□□□□□ -0.17
BRCA1-228ENST00000618469 MXRA7P84157 204 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 ST3GAL3Q11203 375 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 CAMK2DQ13557 499 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 MELKQ14680 651 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 PHYHD1Q5SRE7 291 aa13.98□□□□□ -0.17
BRCA1-228ENST00000618469 GKAP1Q5VSY0 366 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms