RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TAS2R60P59551 318 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 MYBPC1Q00872 1141 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 GALEQ14376 348 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 ZNF273Q14593 569 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 PON3Q15166 354 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 GUSBP1Q15486 140 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 SWI5Q1ZZU3 235 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 PRSS53Q2L4Q9 553 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 KLHL12Q53G59 568 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 ARL13AQ5H913 290 aaPredicted RBP7.62□□□□□ -1.19
GPC6-202ENST00000617456 TOR2AQ5JU69 321 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 CPTPQ5TA50 214 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 RAET1LQ5VY80 246 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 CLEC6AQ6EIG7 209 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 MFSD12Q6NUT3 480 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 NLRC3Q7RTR2 1065 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 ENTHD1Q8IYW4 607 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 C4orf33Q8N1A6 199 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 GTPBP8Q8N3Z3 284 aaPredicted RBP7.62□□□□□ -1.19
GPC6-202ENST00000617456 ZNF611Q8N823 705 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 NUP43Q8NFH3 380 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 OR5M1Q8NGP8 315 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 FNDC9Q8TBE3 224 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 MAGEE2Q8TD90 523 aaPredicted RBP7.62□□□□□ -1.19
GPC6-202ENST00000617456 GPR151Q8TDV0 419 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 TWIST2Q8WVJ9 160 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 CKAP2Q8WWK9 683 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 PYDC1Q8WXC3 89 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 S100ZQ8WXG8 99 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 OR5P2Q8WZ92 322 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 FBXW5Q969U6 566 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 GTPBP3Q969Y2 492 aaKnown RBP7.62□□□□□ -1.19
GPC6-202ENST00000617456 COQ8BQ96D53 544 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 TRMT61AQ96FX7 289 aaKnown RBP7.62□□□□□ -1.19
GPC6-202ENST00000617456 KCNJ15Q99712 375 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 TXN2Q99757 166 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 ZNF416Q9BWM5 594 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 PRR14Q9BWN1 585 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 MRPL37Q9BZE1 423 aaKnown RBP7.62□□□□□ -1.19
GPC6-202ENST00000617456 BHLHE41Q9C0J9 482 aaPredicted RBP7.62□□□□□ -1.19
GPC6-202ENST00000617456 PIGUQ9H490 435 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 TUBB1Q9H4B7 451 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 GP6Q9HCN6 339 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 TNFRSF12AQ9NP84 129 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 GSN-AS1Q9NRJ2 163 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 SH3BP4Q9P0V3 963 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 DAPK2Q9UIK4 370 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 BTNL2Q9UIR0 455 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 ZNF337Q9Y3M9 751 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 AP4S1Q9Y587 144 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 ACTL7BQ9Y614 415 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 CUBNO60494 3623 aa7.62□□□□□ -1.19
GPC6-202ENST00000617456 CR1P17927 2039 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 A0A0U1RQV5 110 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 A0A1W2PRB8 838 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 DUXAA6NLW8 204 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 A8MV72 311 aaPredicted RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 B4DXG7 233 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 H3BML4 177 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 SCDO00767 359 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 SCAMP2O15127 329 aaKnown RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 TLX2O43763 284 aaPredicted RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 TYROBPO43914 113 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 KCNK2O95069 426 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 CDK1P06493 297 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 H2AFB2P0C5Z0 115 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 LINC00032P0C843 101 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 GIFP27352 417 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ELK4P28324 431 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ACVR1BP36896 505 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 CDKN1AP38936 164 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 DDOSTP39656 456 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ETV4P43268 484 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 SUMO3P55854 103 aaPredicted RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 CLDN15P56746 228 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ACTR3P61158 418 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 RPL38P63173 70 aaKnown RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 TEKQ02763 1124 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 EMX2Q04743 252 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ZNF91Q05481 1191 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ATP6AP1LQ52LC2 224 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 C6orf136Q5SQH8 315 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 TFAP2EQ6VUC0 442 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 PLEKHG7Q6ZR37 379 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 MSANTD1Q6ZTZ1 278 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ESPNLQ6ZVH7 1005 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 SSX8Q7RTT4 187 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 ZNF551Q7Z340 670 aaPredicted RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 IGFN1Q86VF2 1251 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 RIMKLAQ8IXN7 391 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 SLC16A11Q8NCK7 471 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 OR56A1Q8NGH5 318 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 OR13C3Q8NGS6 347 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 OR2T11Q8NH01 316 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 SFXN5Q8TD22 340 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 DNAJA4Q8WW22 397 aaPredicted RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 HDAC2Q92769 488 aaKnown RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 MRPL48Q96GC5 212 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms