RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RAB22AQ9UL26 194 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF264O43296 627 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 ARRB2P32121 409 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 AKR1C1Q04828 323 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 SLC35D3Q5M8T2 416 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 MARCH8Q5T0T0 291 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 ZBTB37Q5TC79 503 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 ACOT7LQ6ZUV0 252 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 PDXPQ96GD0 296 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 TEAD3Q99594 435 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 TIMM29Q9BSF4 260 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 GPR174Q9BXC1 333 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 C1orf198Q9H425 327 aa9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 MRPS28Q9Y2Q9 187 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-209ENST00000617103 PRAMEF27A3QJZ7 478 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 TRIM77I1YAP6 450 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 AIPO00170 330 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 BHLHE40O14503 412 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 LGI1O95970 557 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 HNRNPA2B1P22626 353 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 BLVRBP30043 206 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 PRAMEF9Q5VWM5 478 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 PAQR6Q6TCH4 344 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 ALKAL1Q6UXT8 129 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 NKAIN3Q8N8D7 197 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 LMNTD1Q8N9Z9 388 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF511Q8NB15 262 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 OR1M1Q8NGA1 313 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 PPP1R35Q8TAP8 253 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 IL1F10Q8WWZ1 152 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 TAAR8Q969N4 342 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 PDCD1LG2Q9BQ51 273 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 POFUT1Q9H488 388 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 NCDNQ9UBB6 729 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 RARRES3Q9UL19 164 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 CCDC88AQ3V6T2 1871 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 MYADML2A6NDP7 307 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 ZBTB42B2RXF5 422 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 YY2O15391 372 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 B4GALT3O60512 393 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF44P15621 663 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 CD53P19397 219 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 RABIFP47224 123 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 PFN3P60673 137 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 HBG1P69891 147 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 HBG2P69892 147 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 AANATQ16613 207 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 PDLIM3Q53GG5 364 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 CST9LP1Q5W188 147 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 CD300LGQ6UXG3 332 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 C12orf76Q8N812 135 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 MFSD9Q8NBP5 474 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 RNF170Q96K19 258 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 SPNS1Q9H2V7 528 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 ZMAT3Q9HA38 289 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 TAF9BQ9HBM6 251 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 EXOSC3Q9NQT5 275 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 SLC39A9Q9NUM3 307 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 LRP6O75581 1613 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 LOC102725191A0A1B0GVB3 256 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 H7C1C5 153 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 SCGB2A1O75556 95 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 MT-ND4LP03901 98 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 TPOP07202 933 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 CD14P08571 375 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 MSX1P28360 303 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 LCN6P62502 163 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 UPRTQ96BW1 309 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 MYH9P35579 1960 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 RICTORQ6R327 1708 aa9.86□□□□□ -0.83
CLTCL1-209ENST00000617103 BLACEA4D250 179 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 CEBPZOSA8MTT3 80 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 LPLP06858 475 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 GNB3P16520 340 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 LAP3P28838 519 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 UBE2NP61088 152 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 SCGB2A2Q13296 93 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 CLINT1Q14677 625 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 ACSM5Q6NUN0 579 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 FAHD1Q6P587 224 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 ESPNLQ6ZVH7 1005 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 CCDC190Q86UF4 302 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 MCATQ8IVS2 390 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 NANOS1Q8WY41 292 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 TSSK2Q96PF2 358 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 SCPEP1Q9HB40 452 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 GABRQQ9UN88 632 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 TPBGQ13641 420 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 MEP1BQ16820 701 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF765Q7L2R6 523 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 RBM45Q8IUH3 476 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 ANKRD53Q8N9V6 530 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 OR14L1PQ8NHC6 308 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 SHDQ96IW2 340 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 MED18Q9BUE0 208 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 PAPOLGQ9BWT3 736 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 SLIRPQ9GZT3 109 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF768Q9H5H4 540 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 CUTCQ9NTM9 273 aa9.85□□□□□ -0.83
CLTCL1-209ENST00000617103 EXO1Q9UQ84 846 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms