RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 FAM83HQ6ZRV2 1179 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF11A-205ENST00000616710 SLC35F2Q8IXU6 374 aa12.9□□□□□ -0.34
TNFRSF11A-205ENST00000616710 GATSQ8NAP1 163 aa12.9□□□□□ -0.34
TNFRSF11A-205ENST00000616710 MOAP1Q96BY2 351 aa12.9□□□□□ -0.34
TNFRSF11A-205ENST00000616710 RHOFQ9HBH0 211 aa12.9□□□□□ -0.34
TNFRSF11A-205ENST00000616710 A4GALTQ9NPC4 353 aa12.9□□□□□ -0.34
TNFRSF11A-205ENST00000616710 ACTL6AO96019 429 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC35G4P0C7Q5 338 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ID4P47928 161 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 F2RL1P55085 397 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 USP53Q70EK8 1073 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR7D2Q96RA2 312 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 NAA11Q9BSU3 229 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 APMAPQ9HDC9 416 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF275Q9NSD4 429 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TINAGQ9UJW2 476 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LAMA2P24043 3122 aaKnown RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 G3V3Q6 166 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TNFSF12O43508 249 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ADH1AP07327 375 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RNF212Q495C1 297 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF383Q8NA42 475 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 POMGNT2Q8NAT1 580 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ACBD4Q8NC06 268 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RAB3CQ96E17 227 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TOLLIPQ9H0E2 274 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 UQCC1Q9NVA1 299 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CKLFQ9UBR5 152 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CSAG2Q9Y5P2 127 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 EFCAB7A8K855 629 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF736B4DX44 427 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LEFTY1O75610 366 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 POP4O95707 220 aaKnown RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TUBG1P23258 451 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PRPH2P23942 346 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MST1P26927 711 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RSU1Q15404 277 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TAS1R1Q7RTX1 841 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PARGQ86W56 976 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR6K3Q8NGY3 331 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZDHHC12Q96GR4 267 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 UBL7Q96S82 380 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF337Q9Y3M9 751 aa12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CARNS1A5YM72 827 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RFPL4AA6NLU0 287 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RFPL4AL1F8VTS6 287 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TSPAN15O95858 294 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RAG2P55895 527 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GRB14Q14449 540 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SERINC5Q86VE9 423 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF584Q8IVC4 421 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 UROC1Q96N76 676 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 FAM186AA6NE01 2351 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PHIPQ8WWQ0 1821 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PRAMEF27A3QJZ7 478 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PHOX2AO14813 284 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 KIAA0355O15063 1070 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR10H2O60403 315 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LRG1P02750 347 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HOXB5P09067 269 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 BTN3A2P78410 334 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 BATFQ16520 125 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LRP11Q86VZ4 500 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SECTM1Q8WVN6 248 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GLYATL1Q969I3 302 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PELI1Q96FA3 418 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CST11Q9H112 138 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CRLF2Q9HC73 371 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR5V1Q9UGF6 321 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 NYNRINQ9P2P1 1898 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SNRPGP15A8MWD9 76 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC33A1O00400 549 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 B4GALT2O60909 372 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HENMT1Q5T8I9 393 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GDPD4Q6W3E5 623 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HIST2H3AQ71DI3 136 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR2L3Q8NG85 312 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR4K17Q8NGC6 315 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR5AK2Q8NH90 309 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SPACA1Q9HBV2 294 aa12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MRPL22Q9NWU5 206 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11A-205ENST00000616710 A0A087WV48 116 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HMSDA8MTL9 139 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CYTIPO60759 359 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 FGF18O76093 207 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 AQP8O94778 261 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 C1orf105O95561 183 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms