RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 EPHA2P29317 976 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 ADGRE4PQ86SQ3 457 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 RELL2Q8NC24 303 aaPredicted RBP17.45■□□□□ 0.38
SPAST-203ENST00000615843 CHRDQ9H2X0 955 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 EXOSC3Q9NQT5 275 aaKnown RBP17.45■□□□□ 0.38
SPAST-203ENST00000615843 NCDNQ9UBB6 729 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 GMEB2Q9UKD1 530 aa17.45■□□□□ 0.38
SPAST-203ENST00000615843 A0A1B0GWA3 101 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 ADAMTS4O75173 837 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 RAB4AP20338 218 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 RBM39Q14498 530 aaKnown RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 TMEM164Q5U3C3 297 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 ZNF100Q8IYN0 542 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 KCNG3Q8TAE7 436 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 LPAR4Q99677 370 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 P2RY12Q9H244 342 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 CXCL16Q9H2A7 254 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 TAF9BQ9HBM6 251 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 GPR55Q9Y2T6 319 aaPredicted RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 PCYT1BQ9Y5K3 369 aaPredicted RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 PRAMEF27A3QJZ7 478 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 LTB4RQ15722 352 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 GLYATL3Q5SZD4 288 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 PRAMEF9Q5VWM5 478 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 ZNF425Q6IV72 752 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 ZNF511Q8NB15 262 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 KLHDC9Q8NEP7 349 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 TEAD3Q99594 435 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 LRIT2A6NDA9 550 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 EIF4EP06730 217 aaKnown RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 DBHP09172 617 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 TACR3P29371 465 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 DPY19L2P2Q6ZN68 376 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 TMEM99Q8N816 258 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 UCN3Q969E3 161 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 SGK3Q96BR1 496 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 APOOQ9BUR5 198 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 PATZ1Q9HBE1 687 aaKnown RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 BHLHE40O14503 412 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 PMP2P02689 132 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 SBK2P0C263 348 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 CALCBP10092 127 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 UBE2IP63279 158 aaKnown RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 POU3F1Q03052 451 aaPredicted RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 YOD1Q5VVQ6 348 aaPredicted RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 ESPNLQ6ZVH7 1005 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 HIST2H3AQ71DI3 136 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 C12orf76Q8N812 135 aaPredicted RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 GON4LQ3T8J9 2241 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 OR13C7P0DN81 318 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 HNRNPA1L2Q32P51 320 aaKnown RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 RBMS3Q6XE24 437 aaKnown RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 OR9A4Q8NGU2 314 aa17.44■□□□□ 0.38
SPAST-203ENST00000615843 MRPS28Q9Y2Q9 187 aaKnown RBP17.44■□□□□ 0.38
SPAST-203ENST00000615843 TRIM77I1YAP6 450 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 TPPPO94811 219 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 CLINT1Q14677 625 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 FLVCR2Q9UPI3 526 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 TK1P04183 234 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 KLHDC8BQ8IXV7 354 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 ANKRD53Q8N9V6 530 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 MFSD9Q8NBP5 474 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 CLDND1Q9NY35 253 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 ASB1Q9Y576 335 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 URGCP-MRPS24S4R325 110 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 VSTM5A8MXK1 200 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 HHLA1C9JL84 531 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 PRKRAO75569 313 aaKnown RBP17.43■□□□□ 0.38
SPAST-203ENST00000615843 CLDN2P57739 230 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 SELENOVP59797 346 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 ERVK-16P61578 105 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 PRSS36Q5K4E3 855 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 ACOT7LQ6ZUV0 252 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 PLPP7Q8NBV4 271 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 OR1M1Q8NGA1 313 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 SELENOFO60613 162 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 ACVR1Q04771 509 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 RUNX3Q13761 415 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 RHOUQ7L0Q8 258 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 DOK1Q99704 481 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 MED18Q9BUE0 208 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 HRASLSQ9HDD0 168 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 SLC22A11Q9NSA0 550 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 TRAPPC4Q9Y296 219 aa17.43■□□□□ 0.38
SPAST-203ENST00000615843 MYH9P35579 1960 aaKnown RBP17.42■□□□□ 0.38
SPAST-203ENST00000615843 MSX1P28360 303 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 CSNK1A1P48729 337 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 EMP3P54852 163 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 RPP30P78346 268 aaKnown RBP17.42■□□□□ 0.38
SPAST-203ENST00000615843 ZNF266Q14584 549 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 FAM111BQ6SJ93 734 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 USP53Q70EK8 1073 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 FAM57BQ71RH2 274 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 NKAIN4Q8IVV8 208 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 CDH26Q8IXH8 852 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 CLRN3Q8NCR9 226 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 PDXPQ96GD0 296 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 TARM1B6A8C7 271 aa17.42■□□□□ 0.38
SPAST-203ENST00000615843 REEP5Q00765 189 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms