RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 BLOC1S5-TXNDC5H3BN57 136 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 SEC14L5O43304 696 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 PPP1R3DO95685 299 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 ADORA3P0DMS8 318 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF708P17019 499 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 RPL4P36578 427 aaKnown RBP10.22□□□□□ -0.77
SLIRP-212ENST00000613856 P2RY4P51582 365 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 AGFG1P52594 562 aaKnown RBP10.22□□□□□ -0.77
SLIRP-212ENST00000613856 CHN2P52757 468 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 CLDN18P56856 261 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 OR2B6P58173 313 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 RAC3P60763 192 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 CXCR4P61073 352 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 H3F3AP84243 136 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 MYBPC1Q00872 1141 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 PUDPQ08623 228 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 EMC4Q5J8M3 183 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 PDSS1Q5T2R2 415 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 GPR139Q6DWJ6 353 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 FAM122BQ7Z309 247 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 SIAH3Q8IW03 269 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 OR2V1Q8NHB1 315 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 TMEM163Q8TC26 289 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 APH1BQ8WW43 257 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 SMPDL3BQ92485 455 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 HDAC2Q92769 488 aaKnown RBP10.22□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF566Q969W8 418 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 POM121Q96HA1 1249 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 KATNB1Q9BVA0 655 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 YTHDF1Q9BYJ9 559 aaKnown RBP10.22□□□□□ -0.77
SLIRP-212ENST00000613856 FN3KQ9H479 309 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 INIPQ9NRY2 104 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 TVP23BQ9NYZ1 205 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 SEC14L4Q9UDX3 406 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 IL20RAQ9UHF4 553 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 KLHL21Q9UJP4 597 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 PCDHGB5Q9Y5G0 923 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 LIPGQ9Y5X9 500 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 MTORP42345 2549 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 LOC102725191A0A1B0GVB3 256 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 SH3D21A4FU49 640 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 AQP7O14520 342 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 EIF1AYO14602 144 aaKnown RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 TNFSF11O14788 317 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 PRKYO43930 277 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 WBP4O75554 376 aaKnown RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 OR6A2O95222 327 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 TNFAIP8O95379 198 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 IFNGP01579 166 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CRYABP02511 175 aaKnown RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CCDC159P0C7I6 412 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 SDHAP31040 664 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CLDN15P56746 228 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CLDN20P56880 219 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CTXN1P60606 82 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CDK5R2Q13319 367 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 TOP3AQ13472 1001 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 POU4F3Q15319 338 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 SNAPC1Q16533 368 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 OCLNQ16625 522 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 RBM48Q5RL73 367 aaKnown RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 C6orf141Q5SZD1 244 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 MEDAGQ5VYS4 303 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 HBMQ6B0K9 141 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 VASNQ6EMK4 673 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 LAIR2Q6ISS4 152 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 PTCHD4Q6ZW05 846 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 PXKQ7Z7A4 578 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 IGFN1Q86VF2 1251 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CCDC103Q8IW40 242 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 MEIOBQ8N635 442 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 TCEANCQ8N8B7 351 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 ANKK1Q8NFD2 765 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CNIH3Q8TBE1 160 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 ABTB1Q969K4 478 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 CPNE4Q96A23 557 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 ZHX1-C8orf76Q96EF9 292 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 DNAJA3Q96EY1 480 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 PLEKHA8Q96JA3 519 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 ERMAPQ96PL5 475 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 SNX18Q96RF0 628 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 TAAR6Q96RI8 345 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 NAA11Q9BSU3 229 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF696Q9H7X3 374 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 TIGARQ9NQ88 270 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 PAQR5Q9NXK6 330 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-212ENST00000613856 RASD1Q9Y272 281 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 NOX1Q9Y5S8 564 aa10.21□□□□□ -0.77
SLIRP-212ENST00000613856 PCNX1Q96RV3 2341 aa10.21□□□□□ -0.78
SLIRP-212ENST00000613856 TRIM64A6NGJ6 449 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 RIIAD1A6NNX1 92 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 KDM4EB2RXH2 506 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-212ENST00000613856 MS4A18H0YCH9 400 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 M0R129 80 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 M0R3G1 203 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 SLC1A7O00341 560 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 RNF13O43567 381 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 AKR7A3O95154 331 aa10.2□□□□□ -0.78
SLIRP-212ENST00000613856 VAMP5O95183 116 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms