RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GNG8Q9UK08 70 aa9.96□□□□□ -0.81
FAM3A-221ENST00000612856 RAB36O95755 333 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 DNASE1L1P49184 302 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 RAB38P57729 211 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 OR7G2Q8NG99 324 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 OR11H4Q8NGC9 324 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 BBS10Q8TAM1 723 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 NPRL2Q8WTW4 380 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 CREB3L1Q96BA8 519 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 ELP4Q96EB1 424 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 ZC3HAV1LQ96H79 300 aaKnown RBP9.96□□□□□ -0.82
FAM3A-221ENST00000612856 ZC3H10Q96K80 434 aaKnown RBP9.96□□□□□ -0.82
FAM3A-221ENST00000612856 CDC6Q99741 560 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 TREM1Q9NP99 234 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 TAS2R10Q9NYW0 307 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 NDUFAF4Q9P032 175 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 EEF1E1-BLOC1S5C9J1V9 151 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 TRIM3O75382 744 aaPredicted RBP9.96□□□□□ -0.82
FAM3A-221ENST00000612856 PAPLNO95428 1278 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF43P17038 809 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 CLDN20P56880 219 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 BEX5Q5H9J7 111 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 SLC48A1Q6P1K1 146 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 PLBD1Q6P4A8 553 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 CNOT9Q92600 299 aaKnown RBP9.96□□□□□ -0.82
FAM3A-221ENST00000612856 CNRIP1Q96F85 164 aaPredicted RBP9.96□□□□□ -0.82
FAM3A-221ENST00000612856 TMEM43Q9BTV4 400 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 C1QTNF3Q9BXJ4 246 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 FLVCR2Q9UPI3 526 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 ANAPC1Q9H1A4 1944 aa9.96□□□□□ -0.82
FAM3A-221ENST00000612856 RCBTB2O95199 551 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 PPP1R3DO95685 299 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 APOC1P02654 83 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 TCRBP04435 133 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 CTSBP07858 339 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 UCHL1P09936 223 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ZGLP1P0C6A0 271 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 PRR35P0CG20 571 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 HSD11B1P28845 292 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ACVR1BP36896 505 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SFRP5Q5T4F7 317 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SHEQ5VZ18 495 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 TCTN3Q6NUS6 607 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 GDPGP1Q6ZNW5 385 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 GALNTL5Q7Z4T8 443 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 KRT77Q7Z794 578 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SERPINA12Q8IW75 414 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SLC25A45Q8N413 288 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 TMEM105Q8N8V8 129 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 CHTF18Q8WVB6 975 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ZMYND19Q96E35 227 aaPredicted RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 C7orf50Q9BRJ6 194 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 UTP23Q9BRU9 249 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 NXF5Q9H1B4 397 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 MYEF2Q9P2K5 600 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF705EA8MWA4 302 aaPredicted RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 KRBOX1C9JBD0 128 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 GALR3O60755 368 aaPredicted RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 RRASP10301 218 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF3P17036 446 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 CLRN1P58418 232 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SELENOWP63302 87 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF793Q6ZN11 406 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ESPNLQ6ZVH7 1005 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SSX6Q7RTT6 188 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SLC16A13Q7RTY0 426 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF619Q8N2I2 560 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SDR9C7Q8NEX9 313 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 OR8J1Q8NGP2 316 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 POP5Q969H6 163 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SLC41A3Q96GZ6 507 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 PIP5K1AQ99755 562 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 POMT2Q9UKY4 750 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 FARSAQ9Y285 508 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 LINC00862A6NCI5 91 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 ACOT7O00154 380 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 HCRTR1O43613 425 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 FBXO45P0C2W1 286 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 FUT1P19526 365 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 CLLU1Q5K131 121 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 B3GNTL1Q67FW5 361 aaPredicted RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SLC6A19Q695T7 634 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 CXXC5Q7LFL8 322 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 PRSS45Q7RTY3 260 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 SECISBP2Q96T21 854 aaKnown RBP9.95□□□□□ -0.82
FAM3A-221ENST00000612856 EMC6Q9BV81 110 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 B3GAT2Q9NPZ5 323 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 KCND3Q9UK17 655 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 RASD1Q9Y272 281 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 PLXNA3P51805 1871 aa9.95□□□□□ -0.82
FAM3A-221ENST00000612856 A0A1W2PNR3 127 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 NUDT21O43809 227 aaKnown RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 GFRA3O60609 400 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 CTNSO60931 367 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 CSN2P05814 226 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ELK1P19419 428 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 PYCR1P32322 319 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ZFP36L2P47974 494 aaKnown RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 WNT4P56705 351 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms