RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FAM69BQ5VUD6 431 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 FAM205BPQ63HN1 556 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 EXD3Q8N9H8 876 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 ASCC1Q8N9N2 400 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZDHHC12Q96GR4 267 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SNX18Q96RF0 628 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 DPYSL5Q9BPU6 564 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 DUSP15Q9H1R2 295 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 KCNK15Q9H427 330 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 GRHPRQ9UBQ7 328 aa12.78□□□□□ -0.36
PCDHGA3-202ENST00000612467 IGKV3D-11A0A0A0MRZ8 115 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 TMIGD3P0DMS9 266 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 HLA-DMAP28067 261 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 IL12BP29460 328 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 PRPS1P60891 318 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 COL19A1Q14993 1142 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 ARHGAP40Q5TG30 622 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 FCRLAQ7L513 359 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZNF527Q8NB42 609 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 THEM6Q8WUY1 208 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 PHF7Q9BWX1 381 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 NKIRAS2Q9NYR9 191 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 FRRS1LQ9P0K9 344 aa12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 TMA7Q9Y2S6 64 aaKnown RBP12.77□□□□□ -0.36
PCDHGA3-202ENST00000612467 ORC5O43913 435 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 WNT11O96014 354 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 SDHAP31040 664 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 UQCRC1P31930 480 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 HNRNPKP61978 463 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 RRAS2P62070 204 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 TRAM1Q15629 374 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 MEP1BQ16820 701 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 MDGA2Q7Z553 956 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 KCTD12Q96CX2 325 aaKnown RBP12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 MAP6Q96JE9 813 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC46A1Q96NT5 459 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 VN1R1Q9GZP7 353 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 KCNG2Q9UJ96 466 aa12.77□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF879B4DU55 563 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 FAM47E-STBD1D6RA91 191 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 UPK3AO75631 287 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 MAS1P04201 325 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 ADRA2CP18825 462 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 CD53P19397 219 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 HSD11B2P80365 405 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 PLCXD2Q0VAA5 305 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF684Q5T5D7 378 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 COL13A1Q5TAT6 717 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 SFRP4Q6FHJ7 346 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 PYHIN1Q6K0P9 492 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 TIGD4Q8IY51 512 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 TOMM5Q8N4H5 51 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 C1orf216Q8TAB5 229 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 FLVCR2Q9UPI3 526 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 TRAV1-2A0A0B4J238 106 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 CCDC85CA6NKD9 419 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 SHISA8B8ZZ34 492 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 RGS13O14921 159 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 FBXO45P0C2W1 286 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 PNMTP11086 282 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 FBLP22087 321 aaKnown RBP12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 ABCD3P28288 659 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 MELKQ14680 651 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 LINGO2Q7L985 606 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLITRK4Q8IW52 837 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 WDFY1Q8IWB7 410 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 GPR119Q8TDV5 335 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 ADAMTS18Q8TE60 1221 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 PHF21AQ96BD5 680 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC25A38Q96DW6 304 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 OMA1Q96E52 524 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 UBE2ZQ9H832 354 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 LIN7BQ9HAP6 207 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF304Q9HCX3 659 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 TAS2R5Q9NYW4 299 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 PCDHGA9Q9Y5G4 932 aaKnown RBP12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 NPFFR2Q9Y5X5 522 aa12.76□□□□□ -0.37
PCDHGA3-202ENST00000612467 TRAV8-7A0A075B6U6 113 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 FRG2CA6NGY1 282 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 ARL6IP5O75915 188 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 SERPINA3P01011 423 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 YES1P07947 543 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 GUSBP08236 651 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TRAPPC2P0DI81 140 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TRAPPC2BP0DI82 140 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 PRKCAP17252 672 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 CXCL3P19876 107 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 CXCR1P25024 350 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 CAMK2BQ13554 666 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 FAM199XQ6PEV8 388 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 TSSK4Q6SA08 328 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 LRRN1Q6UXK5 716 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR7G1Q8NGA0 311 aa12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 DACT3Q96B18 629 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 GPX7Q96SL4 187 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA3-202ENST00000612467 WWTR1Q9GZV5 400 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms