RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 GSX2Q9BZM3 304 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 ULBP2Q9BZM5 246 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 CRLF2Q9HC73 371 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 SEC14L4Q9UDX3 406 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 FAM32AQ9Y421 112 aaKnown RBP10.82□□□□□ -0.68
CBWD3-208ENST00000612050 ATP23Q9Y6H3 246 aa10.82□□□□□ -0.68
CBWD3-208ENST00000612050 SLC35F4A4IF30 521 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 BLOC1S5-TXNDC5H3BN57 136 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 RPL36A-HNRNPH2H7BZ11 118 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 M0R3G1 203 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 UPK3AO75631 287 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 FOSL1P15407 271 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 DRD4P21917 467 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 CSNK1A1P48729 337 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 PTH2RP49190 550 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 ATP5J2P56134 94 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 PSME3P61289 254 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 CHRNB3Q05901 458 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 FOXD4Q12950 439 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-208ENST00000612050 CEACAM16Q2WEN9 425 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 MS4A18Q3C1V0 323 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 HIKESHIQ53FT3 197 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 YTHDF3Q7Z739 585 aaKnown RBP10.81□□□□□ -0.68
CBWD3-208ENST00000612050 OR4D11Q8NGI4 311 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF566Q969W8 418 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 SGTBQ96EQ0 304 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 BOD1Q96IK1 185 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 OR2M2Q96R28 347 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 WFDC6Q9BQY6 131 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 BARX1Q9HBU1 254 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-208ENST00000612050 GPR35Q9HC97 309 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 KRCC1Q9NPI7 259 aaPredicted RBP10.81□□□□□ -0.68
CBWD3-208ENST00000612050 CMTM6Q9NX76 183 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 NPAP1Q9NZP6 1156 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 B3GAT1Q9P2W7 334 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 SAMD4AQ9UPU9 718 aaKnown RBP10.81□□□□□ -0.68
CBWD3-208ENST00000612050 TACC2O95359 2948 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 POLQO75417 2590 aa10.81□□□□□ -0.68
CBWD3-208ENST00000612050 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 ARPC4-TTLL3A0A0A6YYG9 625 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF99A8MXY4 864 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 NME4O00746 187 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 TRAF3IP2O43734 574 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 SHOX2O60902 331 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF432O94892 652 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 FARS2O95363 451 aaKnown RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 BCL10O95999 233 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 SERPINA1P01009 418 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 IGF2P01344 180 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 TNFRSF1BP20333 461 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 GSK3BP49841 420 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 FABP6P51161 128 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 DAP3P51398 398 aaKnown RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 FOXG1P55316 489 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 BIDP55957 195 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 ZP4Q12836 540 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 PIN1Q13526 163 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 CAMK2DQ13557 499 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 KRT72Q14CN4 511 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 TRAM2Q15035 370 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 GKAP1Q5VSY0 366 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF544Q6NX49 715 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 C16orf89Q6UX73 402 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 SLC35D2Q76EJ3 337 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 TREML1Q86YW5 311 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 ANKS4BQ8N8V4 417 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 WDR31Q8NA23 367 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 CCDC168Q8NDH2 2452 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 SLC38A2Q96QD8 506 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 DHRS9Q9BPW9 319 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 RSPO3Q9BXY4 272 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 MYLK2Q9H1R3 596 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 MED29Q9NX70 200 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 FBXL3Q9UKT7 428 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 USP22Q9UPT9 525 aa10.8□□□□□ -0.68
CBWD3-208ENST00000612050 RAI1Q7Z5J4 1906 aaPredicted RBP10.8□□□□□ -0.68
CBWD3-208ENST00000612050 CSMD2Q7Z408 3487 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 A0A096LPE4 126 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 A0A1W2PPZ6 126 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 LRRN3E7EW58 273 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 OR7A10O76100 309 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 IGHG1P01857 330 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 SAGP10523 405 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-208ENST00000612050 IFNGR1P15260 489 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 ITGA2P17301 1181 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 FUT1P19526 365 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 ARR3P36575 388 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF84P51523 738 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 CLRN1P58418 232 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 ARF1P84077 181 aaKnown RBP10.79□□□□□ -0.68
CBWD3-208ENST00000612050 LTBQ06643 244 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 C3orf36Q3SXR2 165 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 SEZ6L2Q6UXD5 910 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 ZNF813Q6ZN06 617 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 CBLL1Q75N03 491 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 C20orf196Q8IYI0 205 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 MUC15Q8N387 334 aa10.79□□□□□ -0.68
CBWD3-208ENST00000612050 IL17RDQ8NFM7 739 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms