RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 ITPKBP27987 946 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 IGFALSP35858 605 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 CHI3L1P36222 383 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 ACVRL1P37023 503 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RABIFP47224 123 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 CXCR3P49682 368 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RENBPP51606 427 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 CCR5P51681 352 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 SCAND1P57086 179 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 CLDN2P57739 230 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ST8SIA6P61647 398 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RAP1AP62834 184 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RPS25P62851 125 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 PPIAP62937 165 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 ARF5P84085 180 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 NRG1Q02297 640 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 SSBP1Q04837 148 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 GTF2H2Q13888 395 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 BOP1Q14137 746 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 ELAVL3Q14576 367 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 INPP5JQ15735 1006 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 TOMM34Q15785 309 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 SMAD1Q15797 465 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 HAGHQ16775 308 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 PNLIPRP3Q17RR3 467 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ZNF630Q2M218 657 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 ZNF542PQ5EBM4 170 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 XKR6Q5GH73 641 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RIPPLY2Q5TAB7 128 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 HES3Q5TGS1 186 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 FAM72AQ5TYM5 149 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 FAM46CQ5VWP2 391 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ZNF770Q6IQ21 691 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 ADNP2Q6IQ32 1131 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 FAM72DQ6L9T8 149 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 GTF2H2CQ6P1K8 395 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 C22orf39Q6P5X5 142 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ZNF783Q6ZMS7 281 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ASB18Q6ZVZ8 466 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 PARS2Q7L3T8 475 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 NDUFAF7Q7L592 441 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 CXXC5Q7LFL8 322 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 MRGPREQ86SM8 312 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 SYT9Q86SS6 491 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ZNF227Q86WZ6 799 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 FAM72BQ86X60 149 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 VRK3Q8IV63 474 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 PHACTR4Q8IZ21 702 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 PYROXD2Q8N2H3 581 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ARRDC1Q8N5I2 433 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 COMMD1Q8N668 190 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 POGLUT1Q8NBL1 392 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ZNF485Q8NCK3 441 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 OR2L5Q8NG80 312 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 OR2A12Q8NGT7 310 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 OR6K2Q8NGY2 324 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 OR14C36Q8NHC7 312 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 SPPL2AQ8TCT8 520 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 THEM6Q8WUY1 208 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RNF141Q8WVD5 230 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 HSD17B8Q92506 261 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RSC1A1Q92681 617 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 EXT2Q93063 718 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 PPP1R14AQ96A00 147 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 C3orf49Q96BT1 292 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 CMTM7Q96FZ5 175 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 IMP4Q96G21 291 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 SENP5Q96HI0 755 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 LRR1Q96L50 414 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 EGFL8Q99944 293 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 VRK1Q99986 396 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 NIPSNAP1Q9BPW8 284 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 WDR77Q9BQA1 342 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 MGME1Q9BQP7 344 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 CHST8Q9H2A9 424 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 OR52A5Q9H2C5 316 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 WDCPQ9H6R7 721 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 SEC61A2Q9H9S3 476 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 FBRSQ9HAH7 460 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 INPP5EQ9NRR6 644 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 MAN2C1Q9NTJ4 1040 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 ACER3Q9NUN7 267 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 TMEM100Q9NV29 134 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 GAR1Q9NY12 217 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 GALPQ9UBC7 116 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 SLC2A6Q9UGQ3 507 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 FZD4Q9ULV1 537 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 RUVBL1Q9Y265 456 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 PCYT1BQ9Y5K3 369 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 KPTNQ9Y664 436 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 USP9YO00507 2555 aaPredicted RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 SCN2AQ99250 2005 aa4.66□□□□□ -1.66
SSX9-202ENST00000608568 DIDO1Q9BTC0 2240 aaKnown RBP4.66□□□□□ -1.66
SSX9-202ENST00000608568 IGLV3-10A0A075B6K4 115 aa4.65□□□□□ -1.67
SSX9-202ENST00000608568 TBC1D3DA0A087WVF3 549 aa4.65□□□□□ -1.67
SSX9-202ENST00000608568 TBC1D3IA0A087WXS9 549 aa4.65□□□□□ -1.67
SSX9-202ENST00000608568 TBC1D3EA0A087X179 549 aa4.65□□□□□ -1.67
SSX9-202ENST00000608568 TBC1D3KA0A087X1G2 549 aa4.65□□□□□ -1.67
SSX9-202ENST00000608568 BTBD17A6NE02 478 aa4.65□□□□□ -1.67
SSX9-202ENST00000608568 TBC1D3FA6NER0 549 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 338.4 ms