RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CD46P15529 392 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CD53P19397 219 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CRABP1P29762 137 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 DNASE1L1P49184 302 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 RGS6P49758 472 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 B3GALT5-AS1P59052 145 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 TAS2R43P59537 309 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ACTA2P62736 377 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ACTG2P63267 376 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 H3F3AP84243 136 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 GPR50Q13585 617 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 GALEQ14376 348 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 HSPB2Q16082 182 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ACKR1Q16570 336 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 MS4A18Q3C1V0 323 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 KLHL12Q53G59 568 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ARMCX4Q5H9R4 360 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 EEF1A1P5Q5VTE0 462 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 RAET1LQ5VY80 246 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 LEG1Q6P5S2 330 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 DNM1P34Q6PK57 102 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 TMPRSS11AQ6ZMR5 421 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SLC16A12Q6ZSM3 486 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ZBTB46Q86UZ6 589 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 IGFN1Q86VF2 1251 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SYS1Q8N2H4 156 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ZNF485Q8NCK3 441 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 OR9Q1Q8NGQ5 310 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 OR2T27Q8NH04 317 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 RASD2Q96D21 266 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ADAD1Q96M93 576 aaKnown RBP11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 GNRHR2Q96P88 292 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 NMNAT3Q96T66 252 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CNN2Q99439 309 aaKnown RBP11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 NPAS1Q99742 590 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ZNF649Q9BS31 505 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ALG12Q9BV10 488 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ZNF703Q9H7S9 590 aaPredicted RBP11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 DEPPQ9NTK1 212 aa11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ZNF346Q9UL40 294 aaKnown RBP11.04□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 PRSS37A4D1T9 235 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 TRABD2BA6NFA1 517 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ARGFXA6NJG6 315 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 H3BML4 177 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SULT2B1O00204 365 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 PHYHO14832 338 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 AKAP8O43823 692 aaKnown RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 GLSO94925 669 aaPredicted RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SP1P08047 785 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ADRA2AP08913 450 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CD36P16671 472 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CPEP16870 476 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 GALP22466 123 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ETV1P50549 477 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 P2RY4P51582 365 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 AGFG1P52594 562 aaKnown RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 RPS7P62081 194 aaKnown RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 MRPL28Q13084 256 aaKnown RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 TPBGQ13641 420 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 MED22Q15528 200 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CTF1Q16619 201 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 GXYLT1Q4G148 440 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 LINC01590Q5TEZ4 76 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SLC25A25Q6KCM7 469 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 LINC00299Q6ZSB3 139 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ESPNLQ6ZVH7 1005 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 MARCH9Q86YJ5 346 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CYB561A3Q8NBI2 242 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 TMEM178AQ8NBL3 297 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 OR51G2Q8NGK0 314 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SNIP1Q8TAD8 396 aaKnown RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ASB10Q8WXI3 467 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 ZHX1-C8orf76Q96EF9 292 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 KLHL15Q96M94 604 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 C5orf34Q96MH7 638 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 OXGR1Q96P68 337 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 OPALINQ96PE5 141 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SIGLEC12Q96PQ1 595 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 OR5B2Q96R09 309 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 COQ7Q99807 217 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 NAA11Q9BSU3 229 aaPredicted RBP11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 OR51V1Q9H2C8 321 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 MED20Q9H944 212 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SIAEQ9HAT2 523 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 NDUFB11Q9NX14 153 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 KLHL13Q9P2N7 655 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 CNTRLQ7Z7A1 2325 aa11.03□□□□□ -0.64
NEDD8-MDP1-203ENST00000604306 NPIPA5E9PKD4 350 aa11.02□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 BCL10O95999 233 aa11.02□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GAAP10253 952 aa11.02□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 IL11P20809 199 aa11.02□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 AHCYP23526 432 aa11.02□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ACVR1BP36896 505 aa11.02□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 LIPAP38571 399 aa11.02□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GFRA1P56159 465 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms