RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 LRR1Q96L50 414 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 ADAD1Q96M93 576 aaKnown RBP12.26□□□□□ -0.45
RNF40-212ENST00000602784 OR2M2Q96R28 347 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 REEP1Q9H902 201 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 KCNN3Q9UGI6 736 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 NDRG3Q9UGV2 375 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 PKDREJQ9NTG1 2253 aa12.26□□□□□ -0.45
RNF40-212ENST00000602784 A0A1W2PRG6 482 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 PDLIM1O00151 329 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 HNRNPRO43390 633 aaKnown RBP12.25□□□□□ -0.45
RNF40-212ENST00000602784 FKBP6O75344 327 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 PTP4A3O75365 173 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 SLC43A1O75387 559 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 IFNGR1P15260 489 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 COX5AP20674 150 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 COL8A1P27658 744 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 KIR2DL3P43628 341 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 GPR4P46093 362 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 SELENOPP49908 381 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 CCNIQ14094 377 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 LAPTM4AQ15012 233 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 TAF11Q15544 211 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 ZBED5Q49AG3 693 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 TSPO2Q5TGU0 170 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 C1orf94Q6P1W5 598 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 NIPAL3Q6P499 406 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 SLC35D2Q76EJ3 337 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 HDDC2Q7Z4H3 204 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 ZER1Q7Z7L7 766 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 CXorf67Q86X51 503 aaPredicted RBP12.25□□□□□ -0.45
RNF40-212ENST00000602784 UBE2J2Q8N2K1 259 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 STEAP2Q8NFT2 490 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 OR6X1Q8NH79 312 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 FAM222BQ8WU58 562 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 KISS1RQ969F8 398 aaPredicted RBP12.25□□□□□ -0.45
RNF40-212ENST00000602784 FAM46AQ96IP4 442 aaKnown RBP12.25□□□□□ -0.45
RNF40-212ENST00000602784 DACH2Q96NX9 599 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 TNFRSF13CQ96RJ3 184 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 INIPQ9NRY2 104 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 SLC7A10Q9NS82 523 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 ARMC1Q9NVT9 282 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 UPB1Q9UBR1 384 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 DNAJB9Q9UBS3 223 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 SAMHD1Q9Y3Z3 626 aaKnown RBP12.25□□□□□ -0.45
RNF40-212ENST00000602784 ALPK2Q86TB3 2170 aa12.25□□□□□ -0.45
RNF40-212ENST00000602784 UNC79Q9P2D8 2635 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 SLC35F4A4IF30 521 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 ZNF726A6NNF4 738 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 CENPBD1B2RD01 187 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 RPL36A-HNRNPH2H7BZ11 118 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 CLOCKO15516 846 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 OR10H3O60404 316 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 BCL10O95999 233 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 IGHV3-9P01782 118 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 IGHV1-2P23083 117 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 FPR3P25089 353 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 CCKARP32238 428 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 GSSP48637 474 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 DAP3P51398 398 aaKnown RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 ACTR3P61158 418 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 TGFBR3Q03167 851 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 FAPQ12884 760 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 ALG10Q5BKT4 473 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 C1QTNF12Q5T7M4 302 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 ZNF770Q6IQ21 691 aaPredicted RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 SSX8Q7RTT4 187 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 P2RY8Q86VZ1 359 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 MEX3DQ86XN8 651 aaKnown RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 ZNF433Q8N7K0 673 aaPredicted RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 LRRC75AQ8NAA5 344 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 OR13C2Q8NGS9 318 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 OR51A7Q8NH64 312 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 MOSPD2Q8NHP6 518 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 SLC25A44Q96H78 314 aaPredicted RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 BOD1Q96IK1 185 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 TXNDC15Q96J42 360 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 RAB3IPQ96QF0 476 aaPredicted RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 NDEL1Q9GZM8 345 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 MED29Q9NX70 200 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 VNN3Q9NY84 501 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 TAS2R16Q9NYV7 291 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
RNF40-212ENST00000602784 SIGLEC7Q9Y286 467 aa12.24□□□□□ -0.45
RNF40-212ENST00000602784 TRAV27A0A087WT01 109 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 ARRDC5A6NEK1 342 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 UNC119BA6NIH7 251 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 ZNF587BE7ETH6 402 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 GNGT2O14610 69 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 DEAF1O75398 565 aaPredicted RBP12.23□□□□□ -0.45
RNF40-212ENST00000602784 KRT33AO76009 404 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 CCNB2O95067 398 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 IGHMP01871 453 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 F13BP05160 661 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 EPXP11678 715 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 IL32P24001 234 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 MPGP29372 298 aa12.23□□□□□ -0.45
RNF40-212ENST00000602784 DNAJA1P31689 397 aaKnown RBP12.23□□□□□ -0.45
RNF40-212ENST00000602784 BIDP55957 195 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms