RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ULK3Q6PHR2 472 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 DHRS4L2Q6PKH6 230 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 KRT73Q86Y46 540 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 FUNDC1Q8IVP5 155 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 UEVLDQ8IX04 471 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 MSRB3Q8IXL7 192 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 CCDC36Q8IYA8 594 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 IL17RDQ8NFM7 739 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 TLCD1Q96CP7 247 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 SLC47A1Q96FL8 570 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 EMC6Q9BV81 110 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 SPATA5L1Q9BVQ7 753 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 C19orf24Q9BVV8 132 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 DYNLRB1Q9NP97 96 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 KLHL14Q9P2G3 628 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 USP22Q9UPT9 525 aa11.38□□□□□ -0.59
RPS28-204ENST00000602140 A0A087WUJ7 227 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 POLR3GO15318 223 aaPredicted RBP11.37□□□□□ -0.59
RPS28-204ENST00000602140 HLA-HP01893 362 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 IGFBP1P08833 259 aaPredicted RBP11.37□□□□□ -0.59
RPS28-204ENST00000602140 CD79AP11912 226 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 GIFP27352 417 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 MRPL19P49406 292 aaKnown RBP11.37□□□□□ -0.59
RPS28-204ENST00000602140 NCALDP61601 193 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 SNTB2Q13425 540 aaKnown RBP11.37□□□□□ -0.59
RPS28-204ENST00000602140 MFSD13AQ14CX5 517 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 CR1LQ2VPA4 569 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 PAGE3Q5JUK9 113 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 C20orf196Q8IYI0 205 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 CDK20Q8IZL9 346 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 ADPRHL1Q8NDY3 354 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 CKAP2Q8WWK9 683 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 SPDL1Q96EA4 605 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 SLC41A3Q96GZ6 507 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 MS4A3Q96HJ5 214 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 EPYCQ99645 322 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 TMEM27Q9HBJ8 222 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 NOX3Q9HBY0 568 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 TMBIM4Q9HC24 238 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 TCF7L2Q9NQB0 619 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 B3GNT2Q9NY97 397 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 SELENONQ9NZV5 590 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 VAPAQ9P0L0 249 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 CORINQ9Y5Q5 1042 aa11.37□□□□□ -0.59
RPS28-204ENST00000602140 LILRA1O75019 489 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 BGLAPP02818 100 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 ADRA2AP08913 450 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 TACSTD2P09758 323 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 NR4A1P22736 598 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 PPIBP23284 216 aaKnown RBP11.36□□□□□ -0.59
RPS28-204ENST00000602140 APEX1P27695 318 aaKnown RBP11.36□□□□□ -0.59
RPS28-204ENST00000602140 IL2RGP31785 369 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 CHN2P52757 468 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 AQP5P55064 265 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 RGS8P57771 180 aaPredicted RBP11.36□□□□□ -0.59
RPS28-204ENST00000602140 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
RPS28-204ENST00000602140 PIGFQ07326 219 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 PMS2P3Q13401 168 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 SQLEQ14534 574 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 OR1Q1Q15612 314 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 BLOC1S3Q6QNY0 202 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 ZNF813Q6ZN06 617 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 WDFY1Q8IWB7 410 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 ZNF786Q8N393 782 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 C10orf53Q8N6V4 93 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 SCAIQ8N9R8 606 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 OR6S1Q8NH40 331 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 UBASH3BQ8TF42 649 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 TXNDC15Q96J42 360 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 LRR1Q96L50 414 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 MOGAT1Q96PD6 335 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 SNX18Q96RF0 628 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 WFDC6Q9BQY6 131 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 ASPNQ9BXN1 380 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 TPK1Q9H3S4 243 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 B3GAT2Q9NPZ5 323 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 MED29Q9NX70 200 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 TESQ9UGI8 421 aaKnown RBP11.36□□□□□ -0.59
RPS28-204ENST00000602140 POFUT2Q9Y2G5 429 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 CMAHPQ9Y471 501 aa11.36□□□□□ -0.59
RPS28-204ENST00000602140 A0A0B4J2E0 115 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 A0A1B0GX12 115 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 PRORSD1PA6NEY8 169 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 LRRN3E7EW58 273 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 LYNX1G3V0Z9 82 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
RPS28-204ENST00000602140 TPST2O60704 377 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 TGDSO95455 350 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 LYNX1P0DP58 116 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 IFNGR1P15260 489 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 SLC6A2P23975 617 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 AQP1P29972 269 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 IDH3AP50213 366 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 PUDPQ08623 228 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 CAMK2DQ13557 499 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 RIN1Q13671 783 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 SCARB2Q14108 478 aa11.35□□□□□ -0.59
RPS28-204ENST00000602140 TRIP10Q15642 601 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms