RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SAMD8Q96LT4 415 aa17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 CIB1Q99828 191 aa17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 TACO1Q9BSH4 297 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 PLA2G12AQ9BZM1 189 aa17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 C12orf49Q9H741 205 aa17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 NKX1-2Q9UD57 310 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 NOSIPQ9Y314 301 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 EMC9Q9Y3B6 208 aa17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 CDH10Q9Y6N8 788 aa17.75■□□□□ 0.43
SHKBP1-222ENST00000600320 MITFO75030 526 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 GSTM3P21266 225 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 PRPS1P60891 318 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 RFX4Q33E94 735 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 SMARCD3Q6STE5 483 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 SLC35D2Q76EJ3 337 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 AAED1Q7RTV5 226 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 OR6K3Q8NGY3 331 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 ITLN2Q8WWU7 325 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 EMC6Q9BV81 110 aa17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 STX18Q9P2W9 335 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-222ENST00000600320 PCNX1Q96RV3 2341 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 BMP5P22003 454 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 OPRM1P35372 400 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 SELENOPP49908 381 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 SMSP52788 366 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 ERVK-25P63136 954 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 PPP2R2BQ00005 443 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 TOP3AQ13472 1001 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 ACKR1Q16570 336 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 NIPAL3Q6P499 406 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 CASP12Q6UXS9 341 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 MRGPRGQ86SM5 289 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 CLDN22Q8N7P3 220 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 GPX7Q96SL4 187 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 KATNB1Q9BVA0 655 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 OSBPL10Q9BXB5 764 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 OPN3Q9H1Y3 402 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 DCLRE1BQ9H816 532 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 KIF17Q9P2E2 1029 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 ZNF629Q9UEG4 869 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 PRSS50Q9UI38 385 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 TMEFF2Q9UIK5 374 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 ZNF346Q9UL40 294 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 ADAM18Q9Y3Q7 739 aa17.73■□□□□ 0.43
SHKBP1-222ENST00000600320 DIDO1Q9BTC0 2240 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 TENM4Q6N022 2769 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 SOCS2O14508 198 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 EI24O14681 340 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 MGRN1O60291 552 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 ZNF432O94892 652 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 PPP1R3DO95685 299 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 IGHMP01871 453 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 CD14P08571 375 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 CHRNB4P30926 498 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 RPL4P36578 427 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 BIDP55957 195 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 LGALS3BPQ08380 585 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 COX10Q12887 443 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 ARMC4Q5T2S8 1044 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 LPCAT4Q643R3 524 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 KDM4DQ6B0I6 523 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 TFAP2EQ6VUC0 442 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 FAM122BQ7Z309 247 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 CBR4Q8N4T8 237 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 ZNF610Q8N9Z0 462 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 ASB5Q8WWX0 329 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 ASB10Q8WXI3 467 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 TSPAN32Q96QS1 320 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 SLC29A1Q99808 456 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 POLDIP3Q9BY77 421 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 TXNIPQ9H3M7 391 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 ZNF556Q9HAH1 456 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 RNPEPL1Q9HAU8 725 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 PLSCR4Q9NRQ2 329 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 IL20Q9NYY1 176 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 COQ3Q9NZJ6 369 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 PROCRQ9UNN8 238 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 RCE1Q9Y256 329 aa17.72■□□□□ 0.43
SHKBP1-222ENST00000600320 A0A1W2PRG6 482 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 SLC35F4A4IF30 521 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 CLEC18AA5D8T8 446 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 FAM90A27PA6NNH2 459 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 DVL2O14641 736 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 MRPL33O75394 65 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 SMNDC1O75940 238 aaKnown RBP eCLIP17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 BCL10O95999 233 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 IGHV3-9P01782 118 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 OSMP13725 252 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 SLC6A6P31641 620 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 OR3A2P47893 321 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 RUNX1T1Q06455 604 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 DAG1Q14118 895 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 TRIP10Q15642 601 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 SLC36A3Q495N2 470 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 CLEC12AQ5QGZ9 265 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 CLEC18BQ6UXF7 455 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 DPY19L2P2Q6ZN68 376 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 TMEM123Q8N131 208 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 CLEC18CQ8NCF0 446 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 OR4Q3Q8NH05 313 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms