RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 MYBPC1Q00872 1141 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 PIGFQ07326 219 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 NPRL3Q12980 569 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 GNA13Q14344 377 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 CHI3L2Q15782 390 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 PDCD2Q16342 344 aaPredicted RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 DPY19L1Q2PZI1 675 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 PDLIM3Q53GG5 364 aaPredicted RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 FAHD2BQ6P2I3 314 aaPredicted RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 THSD4Q6ZMP0 1018 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 H1FNTQ75WM6 255 aaPredicted RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 C1QL2Q7Z5L3 287 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 COMTD1Q86VU5 262 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 ZNF584Q8IVC4 421 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 NUDCD3Q8IVD9 361 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 LRRC34Q8IZ02 419 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 GPR137CQ8N3F9 429 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 OR51F2Q8NH61 342 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 KIF18AQ8NI77 898 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 ZNF417Q8TAU3 575 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 PNPT1Q8TCS8 783 aaKnown RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 ANP32BQ92688 251 aaKnown RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 SLC25A36Q96CQ1 311 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 LRRC58Q96CX6 371 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 FAHD2AQ96GK7 314 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 TXNDC15Q96J42 360 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 PANX1Q96RD7 426 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 ZNF587Q96SQ5 575 aaPredicted RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 SYT3Q9BQG1 590 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 SPATA9Q9BWV2 254 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 ZNF385DQ9H6B1 395 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 NARFLQ9H6Q4 476 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 AIG1Q9NVV5 245 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 ZNF443Q9Y2A4 671 aaPredicted RBP5.22□□□□□ -1.57
VRK3-220ENST00000600259 RAP2CQ9Y3L5 183 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 GRIP1Q9Y3R0 1128 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 GPR45Q9Y5Y3 372 aa5.22□□□□□ -1.57
VRK3-220ENST00000600259 WNK2Q9Y3S1 2297 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PRKDCP78527 4128 aaKnown RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 IGLV3-9A0A075B6K5 115 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 A0A0G2JPF8 293 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 A0A1B0GWA3 101 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 HNRNPCL2B2RXH8 293 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 HNRNPCL3B7ZW38 293 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 M0R3G1 203 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 SDHDO14521 159 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 AIM2O14862 343 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PPIHO43447 177 aaKnown RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 OR2T1O43869 369 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 TPST2O60704 377 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 HNRNPCL1O60812 293 aaKnown RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 CLPTM1O96005 669 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PNPP00491 289 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 SERPINE1P05121 402 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 SERPINA5P05154 406 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PATE4P0C8F1 98 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 MYZAPP0CAP1 466 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ZCCHC18P0CG32 403 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 HNRNPCL4P0DMR1 293 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 HKR1P10072 659 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 NAT2P11245 290 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 CD79AP11912 226 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 BMP2P12643 396 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 UQCRBP14927 111 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ZNF250P15622 560 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 HTR2AP28223 471 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 GRPRP30550 384 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 CRYBB2P43320 205 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 GIPRP48546 466 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 RPL14P50914 215 aaKnown RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 ANXA11P50995 505 aaKnown RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 NME5P56597 212 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 COPZ1P61923 177 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 RAB1AP62820 205 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 UBA52P62987 128 aaKnown RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 HPCAP84074 193 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 MPP2Q14168 576 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 RAB39AQ14964 217 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 MFSD13AQ14CX5 517 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 GSG1Q2KHT4 349 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 GTDC1Q4AE62 458 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 LIN52Q52LA3 116 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 RPS26P11Q5JNZ5 115 aaPredicted RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 FAM69AQ5T7M9 428 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ATG16L1Q676U5 607 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ACSM5Q6NUN0 579 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 WDR88Q6ZMY6 472 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ZNF813Q6ZN06 617 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 NET1Q7Z628 596 aaPredicted RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 SKA3Q8IX90 412 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PAQR4Q8N4S7 273 aaPredicted RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 LSMEM1Q8N8F7 131 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ADPRHL1Q8NDY3 354 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PIK3C3Q8NEB9 887 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 OR6S1Q8NH40 331 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 RNF217Q8TC41 542 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 SLC38A4Q969I6 547 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 SLC35B4Q969S0 331 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 TMEM19Q96HH6 336 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PKNOX2Q96KN3 472 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms