RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RBM34P42696 430 aaKnown RBP11.4□□□□□ -0.58
USE1-207ENST00000596136 CDH11P55287 796 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 POU3F1Q03052 451 aaPredicted RBP11.4□□□□□ -0.58
USE1-207ENST00000596136 LIPEQ05469 1076 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 HMBOX1Q6NT76 420 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 ZNF627Q7L945 461 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 YTHDF3Q7Z739 585 aaKnown RBP11.4□□□□□ -0.58
USE1-207ENST00000596136 LIPHQ8WWY8 451 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 CMTM5Q96DZ9 223 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 ZNF837Q96EG3 531 aaPredicted RBP11.4□□□□□ -0.58
USE1-207ENST00000596136 TXNDC15Q96J42 360 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 C1QTNF6Q9BXI9 259 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 MOV10Q9HCE1 1003 aaKnown RBP11.4□□□□□ -0.58
USE1-207ENST00000596136 NANSQ9NR45 359 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 GMPR2Q9P2T1 348 aaKnown RBP11.4□□□□□ -0.58
USE1-207ENST00000596136 ABCD2Q9UBJ2 740 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 RIMS3Q9UJD0 308 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 ZNF229Q9UJW7 825 aa11.4□□□□□ -0.58
USE1-207ENST00000596136 SLC35F4A4IF30 521 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 GMNCA6NCL1 334 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 NDUFAB1O14561 156 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 CH25HO95992 272 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 MT-ND1P03886 318 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 TSPAN19P0C672 248 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 ADORA3P0DMS8 318 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 CDH2P19022 906 aaPredicted RBP11.39□□□□□ -0.59
USE1-207ENST00000596136 OR1E2P47887 323 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 SLC7A2P52569 658 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 ARF1P84077 181 aaKnown RBP11.39□□□□□ -0.59
USE1-207ENST00000596136 SPOCK1Q08629 439 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 PIN1Q13526 163 aaPredicted RBP11.39□□□□□ -0.59
USE1-207ENST00000596136 CEACAM16Q2WEN9 425 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 LRRC23Q53EV4 343 aaPredicted RBP11.39□□□□□ -0.59
USE1-207ENST00000596136 PHYHD1Q5SRE7 291 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 C11orf71Q6IPW1 123 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 SLC22A25Q6T423 547 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 KLHL24Q6TFL4 600 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 SLC46A3Q7Z3Q1 461 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 NKAIN4Q8IVV8 208 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 WDFY1Q8IWB7 410 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 DEPDC4Q8N2C3 294 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 GPR137CQ8N3F9 429 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 C10orf53Q8N6V4 93 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 LRRC17Q8N6Y2 441 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 C18orf12Q96KH6 178 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 HS6ST2Q96MM7 605 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 DHRS9Q9BPW9 319 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 CRLF2Q9HC73 371 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 MED29Q9NX70 200 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 A4GNTQ9UNA3 340 aa11.39□□□□□ -0.59
USE1-207ENST00000596136 IGHV1-18A0A0C4DH31 117 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 HTR3EA5X5Y0 456 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 ZNF99A8MXY4 864 aaPredicted RBP11.38□□□□□ -0.59
USE1-207ENST00000596136 CXCR6O00574 342 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 TTKP33981 857 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 GSK3BP49841 420 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 UGT2B15P54855 530 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 ATP5J2P56134 94 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 RIPPLY3P57055 190 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 TAS2R41P59536 307 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 UBE2NP61088 152 aaKnown RBP11.38□□□□□ -0.59
USE1-207ENST00000596136 IL1RL1Q01638 556 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 ETFDHQ16134 617 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 ZNF544Q6NX49 715 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 B3GLCTQ6Y288 498 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 CBLL1Q75N03 491 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 PIGWQ7Z7B1 504 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 CPLX4Q7Z7G2 160 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 BIVMQ86UB2 503 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 CCDC36Q8IYA8 594 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 OR6X1Q8NH79 312 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 TMEM239Q8WW34 195 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 LZICQ8WZA0 190 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 TRMT61AQ96FX7 289 aaKnown RBP11.38□□□□□ -0.59
USE1-207ENST00000596136 COX4I2Q96KJ9 171 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 ADAD1Q96M93 576 aaKnown RBP11.38□□□□□ -0.59
USE1-207ENST00000596136 Q96MF0 132 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 SLC38A2Q96QD8 506 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 BDH2Q9BUT1 245 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 EMC6Q9BV81 110 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 NSRP1Q9H0G5 558 aaKnown RBP11.38□□□□□ -0.59
USE1-207ENST00000596136 ALG2Q9H553 416 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 ARFGEF3Q5TH69 2177 aa11.38□□□□□ -0.59
USE1-207ENST00000596136 NSD1Q96L73 2696 aaPredicted RBP11.37□□□□□ -0.59
USE1-207ENST00000596136 TLN2Q9Y4G6 2542 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 A0A096LPE4 126 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 A0A1W2PPZ6 126 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 ZNF726A6NNF4 738 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 SHOX2O60902 331 aaPredicted RBP11.37□□□□□ -0.59
USE1-207ENST00000596136 OR6A2O95222 327 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 INHBBP09529 407 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 IFNGR1P15260 489 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 CBR1P16152 277 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 AHCYP23526 432 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 NUDT2P50583 147 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 PSME3P61289 254 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms