RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 NOX1Q9Y5S8 564 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 PKDREJQ9NTG1 2253 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 EFCAB9A8MZ26 197 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 C11orf98E9PRG8 122 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 TNFRSF11BO00300 401 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 TRAF3IP2O43734 574 aaPredicted RBP17.1■□□□□ 0.33
PNKP-207ENST00000596014 CST1P01037 141 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 TSPAN19P0C672 248 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 ZNF26P17031 533 aaPredicted RBP17.1■□□□□ 0.33
PNKP-207ENST00000596014 OMPP47874 163 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 RPL18Q07020 188 aaKnown RBP17.1■□□□□ 0.33
PNKP-207ENST00000596014 CASP12Q6UXS9 341 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 BEND4Q6ZU67 534 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 GALNT4Q8N4A0 578 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 OR4C15Q8NGM1 316 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 FAM46AQ96IP4 442 aaKnown RBP17.1■□□□□ 0.33
PNKP-207ENST00000596014 YY1AP1Q9H869 796 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 REEP1Q9H902 201 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 VNN3Q9NY84 501 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 ELOVL5Q9NYP7 299 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 PRSS50Q9UI38 385 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 ANKHD1Q8IWZ3 2542 aaKnown RBP17.09■□□□□ 0.33
PNKP-207ENST00000596014 CRYBG3Q68DQ2 2970 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 SAC3D1A6NKF1 404 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 CDC42EP2O14613 210 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 RNF13O43567 381 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 DENRO43583 198 aaKnown RBP17.09■□□□□ 0.33
PNKP-207ENST00000596014 AQP2P41181 271 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 CLDN17P56750 224 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 POU3F1Q03052 451 aaPredicted RBP17.09■□□□□ 0.33
PNKP-207ENST00000596014 FAM27E3Q08E93 113 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 PPP1R8Q12972 351 aaKnown RBP17.09■□□□□ 0.33
PNKP-207ENST00000596014 LAPTM4AQ15012 233 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 SP5Q6BEB4 398 aaPredicted RBP17.09■□□□□ 0.33
PNKP-207ENST00000596014 TMEM154Q6P9G4 183 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 ZER1Q7Z7L7 766 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 CIB1Q99828 191 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 SCOCQ9UIL1 159 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 HIF3AQ9Y2N7 669 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 SAMHD1Q9Y3Z3 626 aaKnown RBP17.09■□□□□ 0.33
PNKP-207ENST00000596014 U3KQV3 271 aa17.09■□□□□ 0.33
PNKP-207ENST00000596014 OR10H3O60404 316 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 IGHV3-9P01782 118 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 LYNP07948 512 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 CD79BP40259 229 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 SLC9A3P48764 834 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 SELENOPP49908 381 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 RPS4XP62701 263 aaKnown RBP17.08■□□□□ 0.32
PNKP-207ENST00000596014 ATP6AP1Q15904 470 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 OAFQ86UD1 273 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 GABRG1Q8N1C3 465 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 PACRGLQ8N7B6 248 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 ANKK1Q8NFD2 765 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 OR51A7Q8NH64 312 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 CENPNQ96H22 339 aaPredicted RBP17.08■□□□□ 0.32
PNKP-207ENST00000596014 TXNDC15Q96J42 360 aa17.08■□□□□ 0.32
PNKP-207ENST00000596014 KRCC1Q9NPI7 259 aaPredicted RBP17.08■□□□□ 0.32
PNKP-207ENST00000596014 FLNBO75369 2602 aaKnown RBP17.08■□□□□ 0.32
PNKP-207ENST00000596014 TRAV27A0A087WT01 109 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 SERPINI2O75830 405 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 ZNF432O94892 652 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 CNOT4O95628 575 aaKnown RBP17.07■□□□□ 0.32
PNKP-207ENST00000596014 POU2F1P14859 743 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 COL8A1P27658 744 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 PCYT1AP49585 367 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 FHL1Q13642 323 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 ANKDD1AQ495B1 522 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 FBXW9Q5XUX1 488 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 NIPAL3Q6P499 406 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 OR13C2Q8NGS9 318 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 MOSPD2Q8NHP6 518 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 TNFRSF13CQ96RJ3 184 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 GPA33Q99795 319 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 ENKD1Q9H0I2 346 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 MED29Q9NX70 200 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 RCE1Q9Y256 329 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 NBPF19A0A087WUL8 3843 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 GNGT2O14610 69 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 KLF4O43474 513 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 F13BP05160 661 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 IFNGR1P15260 489 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 IGFBP2P18065 325 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 IFNGR2P38484 337 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 TSPO2Q5TGU0 170 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 Q6ZT83 130 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 SLC35D2Q76EJ3 337 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 KIF18BQ86Y91 864 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 UBE2J2Q8N2K1 259 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 LINC00471Q8N535 108 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 ACBD4Q8NC06 268 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 C9orf16Q9BUW7 83 aa17.07■□□□□ 0.32
PNKP-207ENST00000596014 ASH1LQ9NR48 2969 aaKnown RBP17.06■□□□□ 0.32
PNKP-207ENST00000596014 SOCS2O14508 198 aa17.06■□□□□ 0.32
PNKP-207ENST00000596014 SNTB1Q13884 538 aaKnown RBP17.06■□□□□ 0.32
PNKP-207ENST00000596014 P2RY6Q15077 328 aa17.06■□□□□ 0.32
PNKP-207ENST00000596014 MICAQ29983 383 aa17.06■□□□□ 0.32
PNKP-207ENST00000596014 ZBED5Q49AG3 693 aa17.06■□□□□ 0.32
PNKP-207ENST00000596014 ALG10Q5BKT4 473 aa17.06■□□□□ 0.32
PNKP-207ENST00000596014 C6orf52Q5T4I8 152 aa17.06■□□□□ 0.32
PNKP-207ENST00000596014 ZNF770Q6IQ21 691 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms