RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZP4Q12836 540 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ADAM5Q6NVV9 412 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 C20orf204Q6ZNR8 217 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 PXKQ7Z7A4 578 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 OFCC1Q8IZS5 231 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 PGAM4Q8N0Y7 254 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 C17orf78Q8N4C9 275 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 FAM86B1Q8N7N1 296 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 OR1K1Q8NGR3 316 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 TMEM239Q8WW34 195 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 GEMIN6Q8WXD5 167 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 LZICQ8WZA0 190 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 AKAP1Q92667 903 aaKnown RBP eCLIP9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 BCL2L2Q92843 193 aaPredicted RBP9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 MUCL1Q96DR8 90 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 C1QTNF6Q9BXI9 259 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 GPR35Q9HC97 309 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 NGBQ9NPG2 151 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 NANSQ9NR45 359 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ADA2Q9NZK5 511 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 RHCGQ9UBD6 479 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 CD300AQ9UGN4 299 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF229Q9UJW7 825 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 NOX1Q9Y5S8 564 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ZFHX3Q15911 3703 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ABCD4O14678 606 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 SERPINI2O75830 405 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 KRT33AO76009 404 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 IGF2P01344 180 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 IFNW1P05000 195 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 TSPAN19P0C672 248 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 HSD17B1P14061 328 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 IFNGR1P15260 489 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 FUT1P19526 365 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 TCN1P20061 433 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 AHCYP23526 432 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 MSX2P35548 267 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 ARF1P84077 181 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 TGFBR3Q03167 851 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 CAMK2DQ13557 499 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 KRT72Q14CN4 511 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 TBRG1Q3YBR2 411 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF672Q499Z4 452 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 IFI44LQ53G44 452 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 CARD17Q5XLA6 110 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 GLYATQ6IB77 296 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 SSX8Q7RTT4 187 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 ABHD12BQ7Z5M8 362 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 C20orf196Q8IYI0 205 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF611Q8N823 705 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 ANKK1Q8NFD2 765 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 LIPHQ8WWY8 451 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 FAM162AQ96A26 154 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 CCL19Q99731 98 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 CRLF2Q9HC73 371 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 DCAF13Q9NV06 445 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 BEX4Q9NWD9 120 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 EDARQ9UNE0 448 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 AMDHD2Q9Y303 409 aa9.61□□□□□ -0.87
SHKBP1-206ENST00000595523 A0A096LPE4 126 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 A0A1W2PPZ6 126 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF503-AS2A6NEH8 195 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 M0R3G1 203 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 AKAP8O43823 692 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 SEC14L2O76054 403 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 OR7A10O76100 309 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 SEMG1P04279 462 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 T-ENOLP0DO92 83 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 CD40P25942 277 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 HOXC12P31275 282 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 BIDP55957 195 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 TUBA1BP68363 451 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 TUBA4AP68366 448 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 RPL18Q07020 188 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 ST3GAL3Q11203 375 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 FHL1Q13642 323 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 MELKQ14680 651 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 CEACAM16Q2WEN9 425 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 IQCCQ4KMZ1 466 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 GKAP1Q5VSY0 366 aaPredicted RBP9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 HMBOX1Q6NT76 420 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 TUBA1AQ71U36 451 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 FKBP9P1Q75LS8 142 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 SLC35D2Q76EJ3 337 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 NANOGNBQ7Z5D8 188 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 MEX3DQ86XN8 651 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 DEFB107AQ8IZN7 70 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 PIK3C3Q8NEB9 887 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 SGTBQ96EQ0 304 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 C7orf34Q96L11 122 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 LRR1Q96L50 414 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 HS6ST2Q96MM7 605 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 CDRT15Q96T59 188 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 GORASP2Q9H8Y8 452 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 ADAM21Q9UKJ8 722 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 MED31Q9Y3C7 131 aa9.6□□□□□ -0.87
SHKBP1-206ENST00000595523 A0A087WUU8 490 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 ARPC4-TTLL3A0A0A6YYG9 625 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms