RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 AQP1P29972 269 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 SERPINF1P36955 418 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 SELENOPP49908 381 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 EGR4Q05215 589 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 FADDQ13158 208 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 CYLC2Q14093 348 aaPredicted RBP9.05□□□□□ -0.96
VPS4B-207ENST00000591519 EFNB3Q15768 340 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 CYP51A1Q16850 503 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 C6orf89Q6UWU4 347 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 CADM2Q8N3J6 435 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 SLC38A2Q96QD8 506 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 PTDSS2Q9BVG9 487 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 C12orf10Q9HB07 376 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 A4GALTQ9NPC4 353 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 CA10Q9NS85 328 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 ADPRHL2Q9NX46 363 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 LPAR3Q9UBY5 353 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 LOC390937A0A1W2PQ73 354 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 B9A039 149 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF587BE7ETH6 402 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 OR2T1O43869 369 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 UPK3AO75631 287 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 KRT33AO76009 404 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 LGI1O95970 557 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 IGKV3-15P01624 115 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 CRYAAP02489 173 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 GZMKP49863 264 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 PDLIM4P50479 330 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 SH3BGRP55822 239 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-207ENST00000591519 HOXC5Q00444 222 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 CDK6Q00534 326 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 NAAAQ02083 359 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 LGALS3BPQ08380 585 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 SCARB2Q14108 478 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 MAPRE2Q15555 327 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 ADIPOQQ15848 244 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 TRMT5Q32P41 509 aaKnown RBP9.04□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF311Q5JNZ3 666 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 NIPAL3Q6P499 406 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 LINGO2Q7L985 606 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 NET1Q7Z628 596 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-207ENST00000591519 SERPINA11Q86U17 422 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 PHC2Q8IXK0 858 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 DPP10Q8N608 796 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 LSMEM1Q8N8F7 131 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 BBS10Q8TAM1 723 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 TSPEARQ8WU66 669 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 RCN3Q96D15 328 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 FBXO17Q96EF6 278 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 ANKRD27Q96NW4 1050 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 OXGR1Q96P68 337 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 RSPO3Q9BXY4 272 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-207ENST00000591519 BEX2Q9BXY8 128 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 NELFAQ9H3P2 528 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 PLK3Q9H4B4 646 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 MYOZ1Q9NP98 299 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-207ENST00000591519 FBXO9Q9UK97 447 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-207ENST00000591519 CORO2BQ9UQ03 480 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 RCE1Q9Y256 329 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 GMEB1Q9Y692 573 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 MALRD1Q5VYJ5 2156 aa9.04□□□□□ -0.96
VPS4B-207ENST00000591519 SCO2A0A1W2PP80 73 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 AIM2O14862 343 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 SNX3O60493 162 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 LMX1BO60663 402 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 CCDC22O60826 627 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 LY6HO94772 140 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 AHSA1O95433 338 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 CECR9P0C854 216 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 PNMTP11086 282 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 COX4I1P13073 169 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 ETS2P15036 469 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 CBR1P16152 277 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF43P17038 809 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 GPX2P18283 190 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 SLC6A2P23975 617 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 NR4A2P43354 598 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 UBE2NP61088 152 aaKnown RBP9.03□□□□□ -0.96
VPS4B-207ENST00000591519 SNRPD2P62316 118 aaKnown RBP9.03□□□□□ -0.96
VPS4B-207ENST00000591519 RABL3Q5HYI8 236 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 REEP3Q6NUK4 255 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 C5orf46Q6UWT4 87 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 PTOV1Q86YD1 416 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 TREML1Q86YW5 311 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 CCDC36Q8IYA8 594 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 KDM8Q8N371 416 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF540Q8NDQ6 660 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 NUP37Q8NFH4 326 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 IL17RDQ8NFM7 739 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 OR4F15Q8NGB8 312 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 OR10A6Q8NH74 314 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 LRRC58Q96CX6 371 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 KTI12Q96EK9 354 aaPredicted RBP9.03□□□□□ -0.96
VPS4B-207ENST00000591519 FOXN4Q96NZ1 517 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 SORCS2Q96PQ0 1159 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF442Q9H7R0 627 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 B3GAT1Q9P2W7 334 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 USP22Q9UPT9 525 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 ANGPT4Q9Y264 503 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms