RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 BPIFA2Q96DR5 249 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 PIK3IP1Q96FE7 263 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 BOD1Q96IK1 185 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 MUS81Q96NY9 551 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 ALKBH3Q96Q83 286 aaPredicted RBP10.47□□□□□ -0.73
LIG3-213ENST00000590630 OR2M2Q96R28 347 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 PIP5K1AQ99755 562 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 EDARQ9UNE0 448 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 V9GYQ6 96 aa10.47□□□□□ -0.73
LIG3-213ENST00000590630 PLCE1Q9P212 2302 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.46□□□□□ -0.73
LIG3-213ENST00000590630 C11orf98E9PRG8 122 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 BLOC1S5-TXNDC5H3BN57 136 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 RPL36A-HNRNPH2H7BZ11 118 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 hCG_2039718K7EN88 272 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 GYG2O15488 501 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 RNF13O43567 381 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 UPK3AO75631 287 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 PDE5AO76074 875 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 TSPAN19P0C672 248 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 IFI30P13284 250 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 FUT4P22083 530 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 HOXC12P31275 282 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 SH3BGRP55822 239 aaPredicted RBP10.46□□□□□ -0.73
LIG3-213ENST00000590630 SMIM11AP58511 58 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 PRKCDQ05655 676 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 RPL18Q07020 188 aaKnown RBP10.46□□□□□ -0.73
LIG3-213ENST00000590630 LGALS3BPQ08380 585 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 PPA1Q15181 289 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 LCN8Q6JVE9 175 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 HMBOX1Q6NT76 420 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 MBOAT2Q6ZWT7 520 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 SLC35D2Q76EJ3 337 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 RRM2BQ7LG56 351 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 CDH24Q86UP0 819 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 DHFR2Q86XF0 187 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 NRMQ8IXM6 262 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 CDK20Q8IZL9 346 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 GPR137CQ8N3F9 429 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 ASB9Q96DX5 294 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 LRR1Q96L50 414 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 DHRS1Q96LJ7 313 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 ADAD1Q96M93 576 aaKnown RBP10.46□□□□□ -0.73
LIG3-213ENST00000590630 IL1RAPQ9NPH3 570 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 MED29Q9NX70 200 aa10.46□□□□□ -0.73
LIG3-213ENST00000590630 RAI1Q7Z5J4 1906 aaPredicted RBP10.46□□□□□ -0.74
LIG3-213ENST00000590630 DSCAMO60469 2012 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 A0A087WUU8 490 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 A0A1W2PRG6 482 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 SLC35F4A4IF30 521 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 ZNF726A6NNF4 738 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 PIP5K1CO60331 668 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 SERPINI2O75830 405 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 FABP3P05413 133 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 SAGP10523 405 aaPredicted RBP10.45□□□□□ -0.74
LIG3-213ENST00000590630 IFNGR1P15260 489 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 ATP6V1B2P21281 511 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 LOXP28300 417 aaPredicted RBP10.45□□□□□ -0.74
LIG3-213ENST00000590630 FOXG1P55316 489 aaPredicted RBP10.45□□□□□ -0.74
LIG3-213ENST00000590630 RPS4XP62701 263 aaKnown RBP10.45□□□□□ -0.74
LIG3-213ENST00000590630 ROR2Q01974 943 aaKnown RBP10.45□□□□□ -0.74
LIG3-213ENST00000590630 ANKDD1AQ495B1 522 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 IQCCQ4KMZ1 466 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 FGD3Q5JSP0 725 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 C9orf135Q5VTT2 229 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 ALKBH2Q6NS38 261 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 SEZ6L2Q6UXD5 910 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 CYP2R1Q6VVX0 501 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 LINGO2Q7L985 606 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 HDDC2Q7Z4H3 204 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 C20orf196Q8IYI0 205 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 OR6X1Q8NH79 312 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 SLC7A13Q8TCU3 470 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 CCDC124Q96CT7 223 aaKnown RBP10.45□□□□□ -0.74
LIG3-213ENST00000590630 PLPPR2Q96GM1 343 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 TXNDC15Q96J42 360 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 ZNF347Q96SE7 839 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 THTPAQ9BU02 230 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 EMC6Q9BV81 110 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 ESRP2Q9H6T0 727 aaKnown RBP10.45□□□□□ -0.74
LIG3-213ENST00000590630 PLEKHF2Q9H8W4 249 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 CRLF2Q9HC73 371 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 OBP2BQ9NPH6 170 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 B3GAT2Q9NPZ5 323 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 TMEM5Q9Y2B1 443 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 HIF3AQ9Y2N7 669 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 AMDHD2Q9Y303 409 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 SLC25A15Q9Y619 301 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 AKAP9Q99996 3911 aa10.45□□□□□ -0.74
LIG3-213ENST00000590630 A0A1W2PPR1 153 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 NPIPB13A6NJU9 1138 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 EFCAB9A8MZ26 197 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 NPIPB4C9JG80 1138 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 STAMBPO95630 424 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 BCL10O95999 233 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 CDH2P19022 906 aaPredicted RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 MAKP20794 623 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 PAX7P23759 505 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 AQP2P41181 271 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 SLC9A3P48764 834 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms