RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SMCO4Q9NRQ5 59 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 TNFSF18Q9UNG2 199 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 BTBD17A6NE02 478 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 FGF19O95750 216 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 HMGN2P05204 90 aaKnown RBP13.9□□□□□ -0.18
CIRBP-228ENST00000590347 F3P13726 295 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 ACKR3P25106 362 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 RPS11P62280 158 aaKnown RBP eCLIP13.9□□□□□ -0.18
CIRBP-228ENST00000590347 C11orf87Q6NUJ2 197 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 HS6ST2Q96MM7 605 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 RIOK2Q9BVS4 552 aaKnown RBP13.9□□□□□ -0.18
CIRBP-228ENST00000590347 MYNNQ9NPC7 610 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 RCC2Q9P258 522 aaKnown RBP13.9□□□□□ -0.18
CIRBP-228ENST00000590347 ST6GALNAC2Q9UJ37 374 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 CARHSP1Q9Y2V2 147 aaKnown RBP13.9□□□□□ -0.18
CIRBP-228ENST00000590347 SZT2Q5T011 3432 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 A0A0D9SG52 128 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 ACOT7O00154 380 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 MAN2B1O00754 1011 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 SLC31A2O15432 143 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 NPPBP16860 134 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 MAKP20794 623 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 ITGA3P26006 1051 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 OR10K2Q6IF99 312 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 FOXRED2Q8IWF2 684 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 TMEM159Q96B96 161 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 CLEC4EQ9ULY5 219 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 SCN5AQ14524 2016 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 CENPVL1A0A0U1RR11 272 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 IFITM10A6NMD0 228 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 PLPP1O14494 284 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 DCNP07585 359 aaKnown RBP13.9□□□□□ -0.18
CIRBP-228ENST00000590347 SNRPNP63162 240 aaKnown RBP13.9□□□□□ -0.18
CIRBP-228ENST00000590347 NR0B2Q15466 257 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 FAM111BQ6SJ93 734 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 CCDC116Q8IYX3 515 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 MYADMQ96S97 322 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 EDEM2Q9BV94 578 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 ADGRL4Q9HBW9 690 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 NRIP3Q9NQ35 241 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 KLF15Q9UIH9 416 aa13.9□□□□□ -0.18
CIRBP-228ENST00000590347 CASP8AP2Q9UKL3 1982 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 NPIPA5A0A0B4J1W7 369 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 NPIPA7E9PJI5 369 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 TCAPO15273 167 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 ALOX12BO75342 701 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 ARL6IP5O75915 188 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 SLC34A2O95436 690 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 NPIPA8P0DM63 369 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 ZNF28P17035 718 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 IFNGR2P38484 337 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 TMEM44Q2T9K0 475 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 ACTBL2Q562R1 376 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 UQCC3Q6UW78 93 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 Q6ZVL8 140 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 GDF7Q7Z4P5 450 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 TAF8Q7Z7C8 310 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 CD163Q86VB7 1156 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 GPR148Q8TDV2 347 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 ZCCHC2Q9C0B9 1178 aaKnown RBP13.89□□□□□ -0.19
CIRBP-228ENST00000590347 METTL1Q9UBP6 276 aaKnown RBP13.89□□□□□ -0.19
CIRBP-228ENST00000590347 MMP24Q9Y5R2 645 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 GGT3PA6NGU5 568 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 SLC38A8A6NNN8 435 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 PPIHO43447 177 aaKnown RBP13.89□□□□□ -0.19
CIRBP-228ENST00000590347 FBXO24O75426 580 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 IGLV3-27P01718 113 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 HLA-AP01891 365 aaKnown RBP13.89□□□□□ -0.19
CIRBP-228ENST00000590347 COX5BP10606 129 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 VAMP1P23763 118 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 CDKN3Q16667 212 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 DHRS11Q6UWP2 260 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 MBOAT2Q6ZWT7 520 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 KRT77Q7Z794 578 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 ZNF561Q8N587 486 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 AVL9Q8NBF6 648 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 INO80EQ8NBZ0 244 aaPredicted RBP13.89□□□□□ -0.19
CIRBP-228ENST00000590347 OR5T3Q8NGG3 340 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 STEAP1Q9UHE8 339 aa13.89□□□□□ -0.19
CIRBP-228ENST00000590347 TMPRSS11DO60235 418 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 RPLP2P05387 115 aaKnown RBP13.88□□□□□ -0.19
CIRBP-228ENST00000590347 GAAP10253 952 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 RPS27P42677 84 aaKnown RBP13.88□□□□□ -0.19
CIRBP-228ENST00000590347 HTR5AP47898 357 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 PCP4P48539 62 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 NCBP2P52298 156 aaKnown RBP eCLIP13.88□□□□□ -0.199e-14■□□□□ 9.6
CIRBP-228ENST00000590347 EIF2B1Q14232 305 aaKnown RBP13.88□□□□□ -0.19
CIRBP-228ENST00000590347 AMZ1Q400G9 498 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 PGAP1Q75T13 922 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 FAM129CQ86XR2 697 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SKA3Q8IX90 412 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 OR51D1Q8NGF3 324 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 OR5AP2Q8NGF4 316 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 OR4K13Q8NH42 304 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 DIO2Q92813 273 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SLC25A36Q96CQ1 311 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 TMEM68Q96MH6 324 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 AMDHD1Q96NU7 426 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 LMF1Q96S06 567 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms