RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 COPS4Q9BT78 406 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 CCDC90BQ9GZT6 254 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 TXNIPQ9H3M7 391 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 EXO5Q9H790 373 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 A0A1W2PNV4 684 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 AQP7P3A6NL99 342 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 XKRYO14609 159 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 DNPH1O43598 174 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 PDGFAP04085 211 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 CDH11P55287 796 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 RAC3P60763 192 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 TUBA4AP68366 448 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 KRR1Q13601 381 aaKnown RBP19.94■□□□□ 0.78
ATG4D-209ENST00000588857 APOFQ13790 326 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 BBS1Q8NFJ9 593 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 OR2V1Q8NHB1 315 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 SGCDQ92629 289 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 EXTL1Q92935 676 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 ABHD17AQ96GS6 310 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 NMNAT3Q96T66 252 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 ZDHHC11Q9H8X9 412 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 MED20Q9H944 212 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 FANCFQ9NPI8 374 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 TIGARQ9NQ88 270 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 ERVK-18Q9QC07 812 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 SNX5Q9Y5X3 404 aa19.94■□□□□ 0.78
ATG4D-209ENST00000588857 NPIPA5E9PKD4 350 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 RGS10O43665 173 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 IGHMP01871 453 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 DBTP11182 482 aaKnown RBP19.93■□□□□ 0.78
ATG4D-209ENST00000588857 DAP3P51398 398 aaKnown RBP19.93■□□□□ 0.78
ATG4D-209ENST00000588857 HSF1Q00613 529 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 POU3F1Q03052 451 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF91Q05481 1191 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 PIGFQ07326 219 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF239Q16600 458 aaKnown RBP19.93■□□□□ 0.78
ATG4D-209ENST00000588857 Q6ZS92 163 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 GPAT4Q86UL3 456 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 ARIH2OSQ8N7S6 290 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 PTP4A1Q93096 173 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 ABTB1Q969K4 478 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-209ENST00000588857 CNOT2Q9NZN8 540 aaKnown RBP19.93■□□□□ 0.78
ATG4D-209ENST00000588857 NPIPA1Q9UND3 350 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 NOX1Q9Y5S8 564 aa19.93■□□□□ 0.78
ATG4D-209ENST00000588857 H0YC42 278 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 ACTL6AO96019 429 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 HLA-DOBP13765 273 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 ACVR1BP36896 505 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 LHX2P50458 406 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 P2RY4P51582 365 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 SUCLG1P53597 346 aaKnown RBP19.92■□□□□ 0.78
ATG4D-209ENST00000588857 H3F3AP84243 136 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 LEG1Q6P5S2 330 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 TRILQ7L0X0 811 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 ADCK1Q86TW2 530 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 UEVLDQ8IX04 471 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 STX19Q8N4C7 294 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 NPEPL1Q8NDH3 523 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 NEIL3Q8TAT5 605 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 OXGR1Q96P68 337 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 MFRPQ9BY79 579 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 FKBP14Q9NWM8 211 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 RASD1Q9Y272 281 aa19.92■□□□□ 0.78
ATG4D-209ENST00000588857 PRRC2CQ9Y520 2896 aaKnown RBP19.92■□□□□ 0.78
ATG4D-209ENST00000588857 TRGV5A0A0B4J1U4 118 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 NPIPB13A6NJU9 1138 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 NPIPB4C9JG80 1138 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 MRPS14O60783 128 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 BCL10O95999 233 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 PIPP12273 146 aaPredicted RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 HTR1FP30939 366 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 CDKN2AP42771 156 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 EIF1AXP47813 144 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 MTNR1AP48039 350 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 AGFG1P52594 562 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ST3GAL4Q11206 333 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 C1DQ13901 141 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 LINC00303Q3SY05 128 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 KLHL12Q53G59 568 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 KLHL22Q53GT1 634 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 MESTQ5EB52 335 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 NIPAL3Q6P499 406 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 SLC35D2Q76EJ3 337 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 MEPCEQ7L2J0 689 aaKnown RBP19.91■□□□□ 0.78
ATG4D-209ENST00000588857 GHDCQ8N2G8 530 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 MEIOBQ8N635 442 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 OR10D3Q8NH80 312 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ADGRG7Q96K78 797 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 HCAR1Q9BXC0 346 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 OR51V1Q9H2C8 321 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 B3GNT3Q9Y2A9 372 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 IRGMA1A4Y4 181 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 OR6C68A6NDL8 312 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 A6NIZ1 184 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF814B7Z6K7 855 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 K7EM74 188 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 ARHGEF9O43307 516 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 CXCL13O43927 109 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 VAMP5O95183 116 aa19.91■□□□□ 0.78
ATG4D-209ENST00000588857 RENP00797 406 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms