RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 POU4F3Q15319 338 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 NIPAL3Q6P499 406 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 HDDC2Q7Z4H3 204 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 BCDIN3DQ7Z5W3 292 aaKnown RBP27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 MEIOBQ8N635 442 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 ZNF519Q8TB69 540 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 PTP4A1Q93096 173 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 CPNE4Q96A23 557 aaPredicted RBP27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 LDAHQ9H6V9 325 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 B3GAT1Q9P2W7 334 aa27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 WARS2Q9UGM6 360 aaKnown RBP27.78■■■□□ 2.04
CAPNS1-206ENST00000588815 TRGV5A0A0B4J1U4 118 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 TMEM8BA6NDV4 472 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 FAM183AA6NL82 134 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 C1QTNF9BB2RNN3 333 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 LOC400499M0QZD8 3231 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 IGHG3P01860 377 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 C1QTNF9P0C862 333 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 ATP6V1B1P15313 513 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 ZNF708P17019 499 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 HOXD11P31277 338 aaPredicted RBP27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 MTNR1AP48039 350 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 LGALS3BPQ08380 585 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 RNFT1Q5M7Z0 435 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 TRILQ7L0X0 811 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 MEPCEQ7L2J0 689 aaKnown RBP27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 UEVLDQ8IX04 471 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 ABHD17AQ96GS6 310 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 SIGLEC11Q96RL6 698 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 BATF3Q9NR55 127 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 B3GNT3Q9Y2A9 372 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 PCDHGB1Q9Y5G3 927 aa27.77■■■□□ 2.04
CAPNS1-206ENST00000588815 NPIPA5E9PKD4 350 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 BCL10O95999 233 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 RENP00797 406 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 CDK1P06493 297 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 STARP49675 285 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 SLC25A1P53007 311 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 RPS3AP61247 264 aaKnown RBP27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 POU3F1Q03052 451 aaPredicted RBP27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 RAB40BQ12829 278 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 MESTQ5EB52 335 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 LEG1Q6P5S2 330 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 SLC35D2Q76EJ3 337 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 STX19Q8N4C7 294 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 RBMXL3Q8N7X1 1067 aaKnown RBP27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 NMNAT3Q96T66 252 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 NMNAT2Q9BZQ4 307 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 VCX3AQ9NNX9 186 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 NPIPA1Q9UND3 350 aa27.76■■■□□ 2.04
CAPNS1-206ENST00000588815 ALPK2Q86TB3 2170 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 AHCYL1O43865 530 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 PLGP00747 810 aaPredicted RBP27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 PDGFAP04085 211 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 ENPP1P22413 925 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 ACVR1BP36896 505 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 SUCLG1P53597 346 aaKnown RBP27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 NR1H2P55055 460 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 CLDN18P56856 261 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 SLC35D3Q5M8T2 416 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 VASNQ6EMK4 673 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 SVOPQ8N4V2 548 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 CYB561A3Q8NBI2 242 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 OR10D3Q8NH80 312 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 OTULINQ96BN8 352 aa27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 SF3B5Q9BWJ5 86 aaKnown RBP27.76■■■□□ 2.03
CAPNS1-206ENST00000588815 HTR1AP08908 422 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 ZNF43P17038 809 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 SLC2A5P22732 501 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 CDKN2AP42771 156 aaKnown RBP27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 CXADRP78310 365 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 PMP22Q01453 160 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 ST3GAL4Q11206 333 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 UBQLNLQ8IYU4 475 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 KDM8Q8N371 416 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 ASB10Q8WXI3 467 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 ZCCHC14Q8WYQ9 949 aaKnown RBP27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 EXTL1Q92935 676 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 DEFB127Q9H1M4 99 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 EXO5Q9H790 373 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 HAO2Q9NYQ3 351 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 ERVK-18Q9QC07 812 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 TUBD1Q9UJT1 453 aa27.75■■■□□ 2.03
CAPNS1-206ENST00000588815 OR6C68A6NDL8 312 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 TAF4O00268 1085 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 SERPINI2O75830 405 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 HLA-DOBP13765 273 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 RPL5P46777 297 aaKnown RBP27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 LCN1P1Q5VSP4 162 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 NHLRC1Q6VVB1 395 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 SPARTQ8N0X7 666 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 BBS1Q8NFJ9 593 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 RHNO1Q9BSD3 238 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 CCDC90BQ9GZT6 254 aa27.74■■■□□ 2.03
CAPNS1-206ENST00000588815 ANKRD11Q6UB99 2663 aaPredicted RBP27.73■■■□□ 2.03
CAPNS1-206ENST00000588815 IFNGR1P15260 489 aa27.73■■■□□ 2.03
CAPNS1-206ENST00000588815 EIF1AXP47813 144 aaKnown RBP27.73■■■□□ 2.03
CAPNS1-206ENST00000588815 CLDN15P56746 228 aa27.73■■■□□ 2.03
CAPNS1-206ENST00000588815 MVKQ03426 396 aa27.73■■■□□ 2.03
CAPNS1-206ENST00000588815 C1DQ13901 141 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms