RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MEOX1P50221 254 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 ETV1P50549 477 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 DAP3P51398 398 aaKnown RBP10.24□□□□□ -0.77
SMAD4-205ENST00000588745 CCL11P51671 97 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 LCN6P62502 163 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 SLC35A1P78382 337 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 DBPQ10586 325 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-205ENST00000588745 POU4F2Q12837 409 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 GGTLC2Q14390 218 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 MELKQ14680 651 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 MED22Q15528 200 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 DEFB109BQ30KR1 87 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 MS4A18Q3C1V0 323 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 PAQR6Q6TCH4 344 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 B3GLCTQ6Y288 498 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 TMPPEQ6ZT21 453 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 GALNTL5Q7Z4T8 443 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 GHDCQ8N2G8 530 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 NANOGP1Q8N7R0 232 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 EXD3Q8N9H8 876 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 SMPDL3BQ92485 455 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 HAS2Q92819 552 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 YIPF6Q96EC8 236 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 SCMH1Q96GD3 660 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 KLHL15Q96M94 604 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 SFXN2Q96NB2 322 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 OR5M11Q96RB7 305 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 DOK1Q99704 481 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 SCNM1Q9BWG6 230 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 FUNDC2Q9BWH2 189 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 TTTY12Q9BZ98 90 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 RACGAP1Q9H0H5 632 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 ADGRL4Q9HBW9 690 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 RPRD1BQ9NQG5 326 aaKnown RBP10.24□□□□□ -0.77
SMAD4-205ENST00000588745 ASB6Q9NWX5 421 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 CHCHD3Q9NX63 227 aaKnown RBP10.24□□□□□ -0.77
SMAD4-205ENST00000588745 WASF3Q9UPY6 502 aa10.24□□□□□ -0.77
SMAD4-205ENST00000588745 AQP7P3A6NL99 342 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 NPIPA5E9PKD4 350 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 KLRC4-KLRK1H3BQV0 150 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 KLK10O43240 276 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 SEC14L5O43304 696 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 ARHGEF9O43307 516 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 TRMUO75648 421 aaKnown RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 TRAPPC6AO75865 159 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 GLCEO94923 617 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 HPNP05981 417 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 MRPL3P09001 348 aaKnown RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 SBK2P0C263 348 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 LIMS3P0CW19 117 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 LIMS4P0CW20 117 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 HLA-DOBP13765 273 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 TGFBR2P37173 567 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 LIPAP38571 399 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 P2RY4P51582 365 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 TMBIM6P55061 237 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 HSF1Q00613 529 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 POU3F1Q03052 451 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 C1DQ13901 141 aaKnown RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 DOC2BQ14184 412 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 PON3Q15166 354 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 SPHARQ15513 63 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 HYAL4Q2M3T9 481 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 WIPI1Q5MNZ9 446 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 FAM205BPQ63HN1 556 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 IGFL2Q6UWQ7 119 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 SLC35D2Q76EJ3 337 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 PXKQ7Z7A4 578 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 KDM8Q8N371 416 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 TMEM99Q8N816 258 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 POMGNT2Q8NAT1 580 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 TMEM178AQ8NBL3 297 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 FDCSPQ8NFU4 85 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 OR2T4Q8NH00 348 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 SNIP1Q8TAD8 396 aaKnown RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 RAB2BQ8WUD1 216 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 ASB10Q8WXI3 467 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 C12orf43Q96C57 262 aaKnown RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 ZMYND19Q96E35 227 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 COG8Q96MW5 612 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 CNN2Q99439 309 aaKnown RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 NAA50Q9GZZ1 169 aaKnown RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 INPP5EQ9NRR6 644 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 ERVK13-1Q9NX77 482 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 VSX1Q9NZR4 365 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-205ENST00000588745 B3GAT1Q9P2W7 334 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 ENPP5Q9UJA9 477 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 NPIPA1Q9UND3 350 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 MOKQ9UQ07 419 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 FREM2Q5SZK8 3169 aa10.23□□□□□ -0.77
SMAD4-205ENST00000588745 A0A0J9YW62 118 aa10.22□□□□□ -0.77
SMAD4-205ENST00000588745 PRSS37A4D1T9 235 aa10.22□□□□□ -0.77
SMAD4-205ENST00000588745 A6NIZ1 184 aa10.22□□□□□ -0.77
SMAD4-205ENST00000588745 C12orf71A8MTZ7 269 aa10.22□□□□□ -0.77
SMAD4-205ENST00000588745 ZNF814B7Z6K7 855 aa10.22□□□□□ -0.77
SMAD4-205ENST00000588745 H3BMQ9 156 aa10.22□□□□□ -0.77
SMAD4-205ENST00000588745 LINC01387J3KSC0 135 aa10.22□□□□□ -0.77
SMAD4-205ENST00000588745 EFSO43281 561 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms