RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CDC20BQ86Y33 519 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 NAXDQ8IW45 347 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 EXD3Q8N9H8 876 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 GPR148Q8TDV2 347 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 CCDC74AQ96AQ1 378 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 RASD2Q96D21 266 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 KLHL15Q96M94 604 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 BEX1Q9HBH7 125 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 ZNF224Q9NZL3 707 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 PIPOXQ9P0Z9 390 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 KLK11Q9UBX7 282 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 MTFP1Q9UDX5 166 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 STEAP1Q9UHE8 339 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 CDV3Q9UKY7 258 aaKnown RBP16.94■□□□□ 0.3
DDX39A-206ENST00000587730 HS3ST3A1Q9Y663 406 aa16.94■□□□□ 0.3
DDX39A-206ENST00000587730 TRBV5-7A0A0A0MS05 114 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 MEN1O00255 615 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 SRPX2O60687 465 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 MYOGP15173 224 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 RAD52P43351 418 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 CENPAP49450 140 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 GMFBP60983 142 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 HTR4Q13639 388 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 ZNF74Q16587 644 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 LINC00303Q3SY05 128 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 KLHL26Q53HC5 615 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 ALG10Q5BKT4 473 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 LIPNQ5VXI9 398 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 MTFR2Q6P444 385 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 NPSR1Q6W5P4 371 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 FAM122BQ7Z309 247 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 LRRTM1Q86UE6 522 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 BCORP1Q8N888 145 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 OR4N2Q8NGD1 307 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 ELMOD3Q96FG2 381 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 TOE1Q96GM8 510 aaKnown RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 SMAD5Q99717 465 aaKnown RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 PPA2Q9H2U2 334 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 RDH8Q9NYR8 311 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 MRPL15Q9P015 296 aaKnown RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 hCG_1807616A0A1W2PRN6 198 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 GNB5O14775 395 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 B3GALNT1O75752 331 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 RENP00797 406 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 ALDOBP05062 364 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 ZP3P21754 424 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 GPR3P46089 330 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 LTBQ06643 244 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 DBPQ10586 325 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 FUT7Q11130 342 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 ZC3H14Q6PJT7 736 aaKnown RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 ARHGEF39Q8N4T4 335 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 OR9A4Q8NGU2 314 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 MSANTD3Q96H12 275 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 SFXN2Q96NB2 322 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 WDR76Q9H967 626 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 PRTFDC1Q9NRG1 225 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 MED11Q9P086 117 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 MRM2Q9UI43 246 aaKnown RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 LAMP5Q9UJQ1 280 aa16.93■□□□□ 0.3
DDX39A-206ENST00000587730 PPIEQ9UNP9 301 aaKnown RBP16.93■□□□□ 0.3
DDX39A-206ENST00000587730 SCN3AQ9NY46 2000 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 C2orf16Q68DN1 1984 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 TOXO94900 526 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 ABHD16AO95870 558 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 CT45A8P0DMV1 189 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 CT45A9P0DMV2 189 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 CALCRP30988 508 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 CDKN2AP42771 156 aaKnown RBP16.92■□□□□ 0.3
DDX39A-206ENST00000587730 FAM53BQ14153 422 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 SMUG1Q53HV7 270 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 CT45A2Q5DJT8 189 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 TMEM255AQ5JRV8 349 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 FDX2Q6P4F2 183 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 ANKRD16Q6P6B7 361 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 KRT77Q7Z794 578 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 ATG4DQ86TL0 474 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-206ENST00000587730 SLC51BQ86UW2 128 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 TMPRSS12Q86WS5 348 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 BMPERQ8N8U9 685 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 LRRC75AQ8NAA5 344 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 ZNRF4Q8WWF5 429 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 RNF166Q96A37 237 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-206ENST00000587730 PNPLA2Q96AD5 504 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 SEC22CQ9BRL7 303 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 SLC6A17Q9H1V8 727 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 UBQLN4Q9NRR5 601 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 GRHPRQ9UBQ7 328 aa16.92■□□□□ 0.3
DDX39A-206ENST00000587730 IGKV1D-42A0A075B6H8 117 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 A0A1B0GVT2 93 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 A0A1B0GW55 424 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 MCRIP1C9JLW8 97 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 FOXS1O43638 330 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 RP2O75695 350 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 KLF8O95600 359 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-206ENST00000587730 HIST1H2ABP04908 130 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 DUX4L2P0CJ85 424 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 DUX4L3P0CJ86 424 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 DUX4L4P0CJ87 422 aa16.91■□□□□ 0.3
DDX39A-206ENST00000587730 DUX4L5P0CJ88 424 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms