RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CHCHD2Q9Y6H1 151 aaPredicted RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 NPIPA5A0A0B4J1W7 369 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 A0A1B0GWA3 101 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 UNC119BA6NIH7 251 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 HSPB2A8KAH6 182 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 ZNF99A8MXY4 864 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 ALG1L2C9J202 215 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 PTGES3LE9PB15 166 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 NPIPA7E9PJI5 369 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 H7C1Q1 480 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 DVL2O14641 736 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 KLF4O43474 513 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 NDUFB5O43674 189 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 TSPAN2O60636 221 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 WBP4O75554 376 aaKnown RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 REM1O75628 298 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 TRMUO75648 421 aaKnown RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 SEC14L2O76054 403 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 UTS2O95399 124 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 SOX14O95416 240 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 IGKV1D-16P01601 117 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 CDK1P06493 297 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 GKN3PP0CG01 181 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 NPIPA8P0DM63 369 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 SAGP10523 405 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 EPXP11678 715 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 GABRA1P14867 456 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 FOSL1P15407 271 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 GABRB1P18505 474 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 DCKP27707 260 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 HTR2AP28223 471 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 ABCD3P28288 659 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 EPHA2P29317 976 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 FMO3P31513 532 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 CEACAM8P31997 349 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 GRK5P34947 590 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 HTR3AP46098 478 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 GIPRP48546 466 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 NKX6-1P78426 367 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 CDK5Q00535 292 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.02□□□□□ -1.29
VMP1-204ENST00000587259 TMED1Q13445 227 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 C1DQ13901 141 aaKnown RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 CBFBQ13951 182 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 RAB39AQ14964 217 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 NEDD8Q15843 81 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 HSPB2Q16082 182 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 NNATQ16517 81 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 KLHL22Q53GT1 634 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 WIPI1Q5MNZ9 446 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 FNDC7Q5VTL7 733 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 RNLSQ5VYX0 342 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 AHSA2Q719I0 299 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 HMGN2P46Q86SG4 172 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 LUZP2Q86TE4 346 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 CXorf67Q86X51 503 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 GID4Q8IVV7 300 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 SLC15A4Q8N697 577 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 TMCO5AQ8N6Q1 288 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 ZNF441Q8N8Z8 693 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 C9orf106Q8NAJ2 232 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 OR4N2Q8NGD1 307 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 OR13F1Q8NGS4 319 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 RNF217Q8TC41 542 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 FANK1Q8TC84 345 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 PHOSPHO1Q8TCT1 267 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 TMEM255BQ8WV15 326 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 APH1BQ8WW43 257 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 CNOT9Q92600 299 aaKnown RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 MUL1Q969V5 352 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 EFHD2Q96C19 240 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 BPIFA2Q96DR5 249 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 OMA1Q96E52 524 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 DTNBP1Q96EV8 351 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 SGCZQ96LD1 299 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 WFDC6Q9BQY6 131 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 PIGQQ9BRB3 760 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 TMEM43Q9BTV4 400 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 RSPO3Q9BXY4 272 aaPredicted RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 LAT2Q9GZY6 243 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 CTPS2Q9NRF8 586 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 FKBP14Q9NWM8 211 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 FBXO34Q9NWN3 711 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 B4GALT7Q9UBV7 327 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 WIF1Q9Y5W5 379 aa7.02□□□□□ -1.29
VMP1-204ENST00000587259 FBN1P35555 2871 aaKnown RBP7.02□□□□□ -1.29
VMP1-204ENST00000587259 TLN2Q9Y4G6 2542 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ZANQ9Y493 2812 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 A0A087WUJ7 227 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 CENPVL1A0A0U1RR11 272 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 FAM181BA6NEQ2 426 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 TRIM64BA6NI03 449 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 ELOA3DA6NLF2 546 aaPredicted RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 CLDN24A6NM45 220 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 EFCAB9A8MZ26 197 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 GNB5O14775 395 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 PRODHO43272 600 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 XPNPEP2O43895 674 aa7.01□□□□□ -1.29
VMP1-204ENST00000587259 BCAS1O75363 584 aaPredicted RBP7.01□□□□□ -1.29
VMP1-204ENST00000587259 TRIM3O75382 744 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms